| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1981 |
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| Symbol | |
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| ID | 4256609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2341137 |
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| End bp | 2342582 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638122647 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_738027 |
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| Protein GI | 114047477 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00156524 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000367008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTCTC ATAAATTGTC AGTCATTGAA AAGATCGGTT ACGGCTCCGG GGACATGGCC
GTTAACGTGG TGATTTCGTC AATGATGTTA ATTATTACCT TCTTTTATAC TGATATTTTT
GGGTTAAAAC CCGCCGATGT CGGGATATTG TTCCTGTTGG TTCGTCTTAT CGATGCCATT
ACCGATCCTT TAATGGGCAT TATTAACGAT AAAGTGACCA CCCGCTGGGG AAGATATCGC
CCCTACTTCC TGTTTATGGC GATTCCCTTT GGTATTTCGG TTTTCTTAAC CTTCTCAACC
CCAGATTGGG ATTACAATGC CAAACTTATC TGGGCCTACT CGACCTATAT TCTGGTCACT
ATCATCTTCA CCACTGTGAC TATTCCATAT ATTTCGATTA TCAGCGTGAT CACCGACGAT
CCAAAAGAGC GGTTATCCGC CAACGGTTAT CGTTTGTTCT TTGCAAAGAT TGCCGCCTTT
TTAGTGACCA TTATCGTGCC TATGTTGGCG TCATCTTGGG GCGGAGAGAA CATTGCCGCG
GGCTATCAAA AAGCCATGGG CGTGATGGCA TTTATGGCAA CACTACTGTT TTTATTCTGC
TTTTTCACTA CCACAGAGCG CGTGGCCTAC AAGGTGGAAA CTAAGCCTGT TGGCATGCAA
CTGCGATTAT TGTTCAAAAA CGATCAATGG TTAGTGTTAG TCGCGATTTG TGTGATTGGC
ACCATTGGCT ATGTGATCCG CGGCTCGGTA GCAGCCTACT ACGCCACCTA TTACTTGGGC
GGCGATGCCA AAATGCTCTC GGCATTCCTG TCGACCGGTG TGGGCGCTGC CATTCTGGCC
ATGGTCGCTT CAACTTGGAT CACTAAGCGT TACTGCAAAC TAAAACTCTT CCGCTACAGC
CAAATCGTGG TTGGGATTTT AAGCGCCATC ATGTTCTTTG CAGTGCAGCC GGGCGACATA
GTGCTGGCCT TCGTACTCTA CTTTGCGATT TCATTTGTGG TGGATTTACA TGCGCCTGTC
TTCTGGTCTG TGATTTCAGA GTCGGTGGAT TATGGCATAG TCAAAACGGG CCACAGGGTC
TCTGGCCTTG CCTTTGGCGG GATCTCATTC GCCCAAAAAG CGGGAATGGG CGCGGCGGGA
TTTGTGGTGG GTATGCTGCT GACCTACTTC AACTATCAAC CCGGTGAAAC CCAAAGCGAG
TTTGCGTTGA CCGGTATTTC GTTAATGCTG ACGGTGATCC CTGGCGCATT CCACGCGCTG
ATGGGCTTAC TGATGTTCAA ATACAAGATT TCTGACCGCG TTTATGAAGA AATCAAACAG
GCTTTACCCG AGCAGGCCCA TTTAAGCCAA ACGGACGCCA ACCTGACGTC TAAGGCTTTA
GCCTCTAGTA CTGAAGCCTC TGAGGCAGTA ACGCCTAAGA CTGCAGCGCC TCAAGTATCG
GCGTAA
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| Protein sequence | MSSHKLSVIE KIGYGSGDMA VNVVISSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI
TDPLMGIIND KVTTRWGRYR PYFLFMAIPF GISVFLTFST PDWDYNAKLI WAYSTYILVT
IIFTTVTIPY ISIISVITDD PKERLSANGY RLFFAKIAAF LVTIIVPMLA SSWGGENIAA
GYQKAMGVMA FMATLLFLFC FFTTTERVAY KVETKPVGMQ LRLLFKNDQW LVLVAICVIG
TIGYVIRGSV AAYYATYYLG GDAKMLSAFL STGVGAAILA MVASTWITKR YCKLKLFRYS
QIVVGILSAI MFFAVQPGDI VLAFVLYFAI SFVVDLHAPV FWSVISESVD YGIVKTGHRV
SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGETQSE FALTGISLML TVIPGAFHAL
MGLLMFKYKI SDRVYEEIKQ ALPEQAHLSQ TDANLTSKAL ASSTEASEAV TPKTAAPQVS
A
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