| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1965 |
|---|
| Symbol | |
|---|
| ID | 4258110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2319461 |
|---|
| End bp | 2319940 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638122631 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738011 |
|---|
| Protein GI | 114047461 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0441287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00747997 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AACAACCCTG GTATAAGCAG TTTTGGCCTT GGTTTTTAAT TATTCTTCCT
TTGTGTGCCG TCGTCGCAAG TTTTACCACG CTAAAAATTG CCCTCTCTAA CTCTGACTCT
CTGGTCGCCG AGGATTATTA CAAAGAAGGC AAAGCCATTA ACATGGACTT GAGTAAAGTC
AAATATGCCA AGCAGCTCGG CATGCAATGG CAACTCGAAC AAAATCACCA CGAAGTGCTA
TTCACCCAAC ACGGTGGACC TGCCTATCAA GCCGCGTTAA AAGTCGAATT TTATCACCCA
ACGATTGCCG AAAAAGACAT CAAGATGACG GTAACGGCCG ATGCGAACCA TGTGTATCGC
ATTACTCTGC CCGATGTATT AACAGGTGCT TGGGAAGTCC GCCTCGAAGG TTTTGACGGT
AAATGGCGTA TTCATCAACG TGTCGAACTC AAAGACAACG TCCAATTGTG GTTGAACTAA
|
|---|
| Protein sequence | MSEQQPWYKQ FWPWFLIILP LCAVVASFTT LKIALSNSDS LVAEDYYKEG KAINMDLSKV
KYAKQLGMQW QLEQNHHEVL FTQHGGPAYQ AALKVEFYHP TIAEKDIKMT VTADANHVYR
ITLPDVLTGA WEVRLEGFDG KWRIHQRVEL KDNVQLWLN
|
|---|
| |