Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1959 |
Symbol | |
ID | 4258104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2313193 |
End bp | 2314161 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122625 |
Product | C32 tRNA thiolase |
Protein accession | YP_738005 |
Protein GI | 114047455 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00791076 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGGAAG CTATGTCTGA AGTTACGGCG AGTCAAATGC CTGAAGAATT ATCAAAAAAA CAAATTACCC GTCTGAATAA ATTACAGAAG CGTCTGCGCC GTGAAGTGGG TAGTGCCATC GCCGATTACA ACATGATTGA AGATGGCGAC CGAGTCATGT GCTGCTTAAG TGGCGGTAAA GACAGTTACG CCATGCTAGA TATTCTGCTT AATCTACAGC AGCGCGCGCC CGTACAGTTC GAAATTATTG CCGTAAACTT AGATCAAAAG CAGCCGGGTT TCCCTGAACA CGTACTGCCA GCCTATTTAG ACAGCCTAAA TATTCCTTAT CACATCCTCG AGAAAGACAC TTACTCGATT GTGAAAGAGA AGATCCCTGA AGGCAAAACC ACTTGCTCGC TGTGCTCTCG CCTGCGTCGC GGTACTCTCT ATGGCTTTGC CCAGCGCATT GGCGCAACCA AAATCGCGCT AGGCCACCAC AGAGACGATA TTATTGAGAC CATGTTCCTC AACATGTTCT ACGGCGGCAA GATGAAAGCC ATGCCACCTA AGTTGCTCTC GGACGACGGC GCTAACGTGG TTATTCGTCC ACTCGCCTAT TGCCGCGAAA AGGATTTAGA AGAATATGCG GAATTGAAAA AATTCCCCAT CATTCCCTGT AACCTTTGTG GCTCGCAGGA AAACCTAAAG CGTCAAGCAG TGAAAGACAT GCTCAATCAG TGGGATAGAC TCTACCCAGG CCGTATTGAA ACCATTTTCA CCGCCATGCA AAACACCGCC CCTTCACAGG GCGTTGACCG TGAGCAGTTT GACTTTGTGT CCTTGAAACG CGATCCCAAC GCGCCGATGA AGGGTGATGT GGCCGAAGCC GATTTACCCG CATTTGACTT TTTAGATATC GCCAACAGCG GCCATATCGA TTTAGATGCG GCAAAACGCA TCAATATCGT CAACGTTTAC GAAGCCTAA
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Protein sequence | MLEAMSEVTA SQMPEELSKK QITRLNKLQK RLRREVGSAI ADYNMIEDGD RVMCCLSGGK DSYAMLDILL NLQQRAPVQF EIIAVNLDQK QPGFPEHVLP AYLDSLNIPY HILEKDTYSI VKEKIPEGKT TCSLCSRLRR GTLYGFAQRI GATKIALGHH RDDIIETMFL NMFYGGKMKA MPPKLLSDDG ANVVIRPLAY CREKDLEEYA ELKKFPIIPC NLCGSQENLK RQAVKDMLNQ WDRLYPGRIE TIFTAMQNTA PSQGVDREQF DFVSLKRDPN APMKGDVAEA DLPAFDFLDI ANSGHIDLDA AKRINIVNVY EA
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