Gene Shewmr7_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1953 
Symbol 
ID4258378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2305684 
End bp2306571 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content46% 
IMG OID638122616 
Producthypothetical protein 
Protein accessionYP_737999 
Protein GI114047449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000171054 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00261274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGACAAA ATCTAGTAAT AATTACATCA TTTGCCCTCA CAATAAGCCT TTTCGGTTGT 
GATAATGGCC GAAATATCGA ATCTATTTGT AAAAATAATC CTGAAATTTG TGCCGATTTG
CATAAGGATG GTTGGTGTTT AACCGAGAAA ACGCAGCTGA TCCAGAGCCG CTTTGACCTA
TTAGGCAACA AAAATCCTAC GGGGAAGCAA CTTTATCAAC AGTTAACTTA CCTTGAGGAT
TACAGTCGGT GTATTGAATT GGCCTCAGGG GTACAACATA TCATCCATAC CAATCGCACG
GCTGATAGAG CCAGAGCCTT TCGTCTCAGC ACGCAAAACC TCAGTCGATT ACAGGATGAA
ACCCGCGAGC GCCAAGATCC TTTTATGTCT TACTATCAAT GGACACGTTT TGGCGACACC
GATGCCTTAA ACCGATTATT GGCGCAAGAA AATGCTGGTG AAGTGACCGA ACCCTTTCTT
TTAGCGCAAA TAGCCACCTA CTACAGCAAT CGAAATGCCA TTAAAGCGCA ACAACTGTAC
CTTAACGTGT TTGCTGGGAT TCAGTACGCC GACTTTGACC CTAACTGGCT GCTTGGACTC
GCCTCGGCCT ATCGTCAGAC CCAAGAGCTG GAAAAAACCT ATATGCTGAC CAAAGCCAAT
TTACTACTTA CGCAGCAGAA GTATTCCGAA GATAAGATGC TAGCCTTAAT CGGTGGCGAC
AAGACGCTAG CGGCCAAATT AGATCAATAC GCCCAGAACT TAATCGACGC GTTAGAAGAT
GGCCTCTATT CGACCAGTCC GGTTGCGCTC TGGCTTGCTC CGCCCCAGAC GGCGGTAACA
CCGCCTGCGG CAACAACTGT CGAGCCAGAA AAGCCAAATT CGCCTTAA
 
Protein sequence
MRQNLVIITS FALTISLFGC DNGRNIESIC KNNPEICADL HKDGWCLTEK TQLIQSRFDL 
LGNKNPTGKQ LYQQLTYLED YSRCIELASG VQHIIHTNRT ADRARAFRLS TQNLSRLQDE
TRERQDPFMS YYQWTRFGDT DALNRLLAQE NAGEVTEPFL LAQIATYYSN RNAIKAQQLY
LNVFAGIQYA DFDPNWLLGL ASAYRQTQEL EKTYMLTKAN LLLTQQKYSE DKMLALIGGD
KTLAAKLDQY AQNLIDALED GLYSTSPVAL WLAPPQTAVT PPAATTVEPE KPNSP