Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1946 |
Symbol | |
ID | 4258371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2297358 |
End bp | 2298392 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122609 |
Product | succinylglutamate desuccinylase |
Protein accession | YP_737992 |
Protein GI | 114047442 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2988] Succinylglutamate desuccinylase |
TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000247019 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGTTACAAG CTCTGTTAGA TTCGAAGGAT TTTCTCGCGC TGACCCTCGC CAATCCTGAA ACCCTTGGAG ATGAGTTTAG TTTCGCCTTA GGGGAGCATA CTCGAGTCGA AGTGTGGGAC ACGGGTGTCA TCGTCTTTGA GCCAGCACAA GCCCAAGGTA AGGATGTCAT TCTCTCCTGC GGTGTCCACG GTAATGAAAC CGCACCCATC GAACTCTGCA ATACCTTAAT CAAACAGCTT CTCCAACAAA AAATCATCGC CAAACAACGC ACGCTCTTTC TTATTGGTAA CCCTTTAGCG ATTAATAACG GCACTCGCAT TATCGACGAG AACATGAATC GTCTGTTTAG TGGCGAGCAT TCAAACCCAC CGGGATTAGT GAATCCTGAG CGGGTGCGGG CAAAAAAATT AGAAGCCTAT GTCGACCGCT TCTTTAAGGG CGCAGCTGCA GGGCGCCAGC GTATTCACTA CGATTTACAC ACGGCGATGC GGGCGTCAAA ACACGAAAAG TTTGCGATTT ATCCCTATCG TCCCGGCCGT GCTTACAGCG CCGAGCAAAT CATGTTTTTA GCCGCCAGTG GCGTCGATAC TGTGTTATTT CACCATGAGC CGACAACCAC CTTTAGCTAT TTTTCCTCCG AGCAGTATGG CGCCGATGCC TTTACCATTG AATTAGGTAA GGTGTATCCC ATGGGGCAAA ACGATATGAC GCGTTTTATT GCCGCCCAAG AGATGTTTAT GCGCCTTATC ACAGACAAAC CCTTAGCGCT TGAGCCATTC TCAGCGGATA AGGTGAATCT GTATCAAGTG TGTCGGGTGA TTAACAAACA TTTTGATGAT TTTGAATTTA CCTTCGCGAC CGATGTCGAA AACTTCCGAT CGTTCCCGAA AGGCTTTGTA TTGGCTCGAG AGGGTGGGCA GGAAATTAAA GTCGAACAGG AATTTGAAGC GATTGTCTTC CCCAATGCTA AGGTGCCCAT CGGTAATCGC ACTGTGATTT GCCTGATCCC TTCAGTCGCG CCAGATGTTC GCTAG
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Protein sequence | MLQALLDSKD FLALTLANPE TLGDEFSFAL GEHTRVEVWD TGVIVFEPAQ AQGKDVILSC GVHGNETAPI ELCNTLIKQL LQQKIIAKQR TLFLIGNPLA INNGTRIIDE NMNRLFSGEH SNPPGLVNPE RVRAKKLEAY VDRFFKGAAA GRQRIHYDLH TAMRASKHEK FAIYPYRPGR AYSAEQIMFL AASGVDTVLF HHEPTTTFSY FSSEQYGADA FTIELGKVYP MGQNDMTRFI AAQEMFMRLI TDKPLALEPF SADKVNLYQV CRVINKHFDD FEFTFATDVE NFRSFPKGFV LAREGGQEIK VEQEFEAIVF PNAKVPIGNR TVICLIPSVA PDVR
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