Gene Shewmr7_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1943 
Symbol 
ID4258368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2294208 
End bp2294759 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content50% 
IMG OID638122606 
Productreplication initiation regulator SeqA 
Protein accessionYP_737989 
Protein GI114047439 
COG category[L] Replication, recombination and repair 
COG ID[COG3057] Negative regulator of replication initiationR 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000703292 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00169881 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATACA TCGAAGTGGA TGAAGAGCTC TATCGTCATA TTGCCAGCAA AACGGAACGT 
ATTGGTGAGA GCGCCTCTGA CATTCTCCGT CGATTACTCG GCCTGTCCGT CGATGCGGTT
GAACAGGCGC AGCCACAGGC CATTAGCCAA CCGAGTTTAG AGGCAGCGAC ACCTGAGCCA
CAAATTGCGC CTCAGGTCGA AACCTTAGTC TCTGCGACCG ATTTCAATCA ATTGGTGGAT
GAGCATAAGT TAGAGCAGCA AAAAGGCGCC GTGGGTCGCT TCTTATTTTT GCTCGAGAGT
CTGTATCAAC AGAGCCAAGC GCAATTCTCG CAAATTTTAC AGATCCAAGG TCGCGATCGA
CTCTATTTTG CGCGCTCACG GGAAGAGTTA CTCAAGGCCA GTGCTACCGC CAACCCAAAG
GAAATCGGTA ATACTGGATT TTGGGTCACG ACCAACAATA ACACCGCCAA AAAACGGGCG
ATTTTAGTCG AAGCCTTAAT ACAATTTGGC TGCGATGCCC AAATCGCCAA CGGCATTGCC
GAACGCGTAT AA
 
Protein sequence
MKYIEVDEEL YRHIASKTER IGESASDILR RLLGLSVDAV EQAQPQAISQ PSLEAATPEP 
QIAPQVETLV SATDFNQLVD EHKLEQQKGA VGRFLFLLES LYQQSQAQFS QILQIQGRDR
LYFARSREEL LKASATANPK EIGNTGFWVT TNNNTAKKRA ILVEALIQFG CDAQIANGIA
ERV