| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1933 |
|---|
| Symbol | |
|---|
| ID | 4258461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2284298 |
|---|
| End bp | 2285638 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638122596 |
|---|
| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
|---|
| Protein accession | YP_737979 |
|---|
| Protein GI | 114047429 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00212901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0779588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCAA GTGTTTGGCA AGAACGCCGC CATGGCGAAG ATAAACAAAG ACGTAATGAT
CATCGAAGCC CTTTCCAAAG GGACAGAGCA AGGATCCTCC ACTCAGCCGC CTTTCGCCGC
CTACAGGCCA AGACCCAAGT GCTTGGGGTG GGCATGAATG ACTTTTATCG CACACGCTTA
ACCCATTCAC TCGAAGTGTC ACAAATCGGC ACGGGCATCG CCGCGCAGCT CAGCCGCAAG
TATCCCGAGC ATAAGCCCTT ATTAGGCTCG ATGAGCCTAC TCGAATCCCT CTGTCTTGCC
CATGATATTG GCCATCCGCC CTTTGGCCAT GGCGGTGAAG TCGCGCTCAA CTATATGATG
CGCCACCACG GTGGCTTTGA AGGCAATGGC CAGACGTTTC GTATTCTCTC GAAACTCGAG
CCTTACACCG AGGCCTTTGG GATGAATCTG TGCCGCCGTA CTATGCTCGG CATTTTAAAA
TATCCCGCGC CGCAATCACT GCTGTTTGTG GCAGGTTCGC ATCCTGAAAT CACCAATCAC
AGACAGCTTA AACCATCACA ATGGCCGCCT GTTAAAGGCA TATTCGACGA TGATAGCGAC
ATTTTCGATT GGGTACTGGA ACCGTTATCC GTTGCCGATA GAGCGCGCTT TACCTCCGTT
CAGCCGAGCC TGCAGCCAAA CTACCCGCAT CTACGCACTC AATTTAAATC CTTCGATTGC
TCGATTATGG AACTGGCAGA CGACATCGCC TACGCAGTGC ACGATCTTGA AGATGCGATT
GTCATGGGCA TAGTCACCGC CTCGCAATGG CAACAGGATG TGGCGCCGAC ACTTAAGCAC
AGTGGCGATC CTTGGATCCG CCAGGAGCTT GCCGATATCG GCACTAAGCT CTTCTCCCAT
GAACATCATC TGCGAAAGGA TGCCATCGGC ACCTTAGTAA ATGGTTTTGT CACCGCCATT
ATTATCAACG ACGATCCGGC CTTCGAGGAA CCGTTGCTGC GGTTTAATGC CAGCCTCGAA
CCCGAATTTG CTAATGCGCT CAATGTGCTA AAGCAGTTAG TGTTTAAATA CGTTATCCGT
AAACCCGAGA TCCAAATGCT GGAATACAAG GGCCAACAGA TAGTGATGGG ACTCTTCGAA
GCGTTCGCCT CGGATCCGGA GCGGTTATTA CCACTCAATA CCCAAGAACG CTGGCGCACC
AGTGAGCAGC AAGGCCAAAA CAGCCACAGG GTGTTGGCAG ATTATATTTC TGGCATGACG
GATGAATTTG CCGGACGACT GTACCAGCAG TTGTTTAGCC CCAAGGCTGG CTCCAACGTG
GAACTCAGCA AAGAGATGTA G
|
|---|
| Protein sequence | MSSSVWQERR HGEDKQRRND HRSPFQRDRA RILHSAAFRR LQAKTQVLGV GMNDFYRTRL
THSLEVSQIG TGIAAQLSRK YPEHKPLLGS MSLLESLCLA HDIGHPPFGH GGEVALNYMM
RHHGGFEGNG QTFRILSKLE PYTEAFGMNL CRRTMLGILK YPAPQSLLFV AGSHPEITNH
RQLKPSQWPP VKGIFDDDSD IFDWVLEPLS VADRARFTSV QPSLQPNYPH LRTQFKSFDC
SIMELADDIA YAVHDLEDAI VMGIVTASQW QQDVAPTLKH SGDPWIRQEL ADIGTKLFSH
EHHLRKDAIG TLVNGFVTAI IINDDPAFEE PLLRFNASLE PEFANALNVL KQLVFKYVIR
KPEIQMLEYK GQQIVMGLFE AFASDPERLL PLNTQERWRT SEQQGQNSHR VLADYISGMT
DEFAGRLYQQ LFSPKAGSNV ELSKEM
|
|---|
| |