Gene Shewmr7_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1918 
Symbol 
ID4258657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2266139 
End bp2266627 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID638122581 
Producthypothetical protein 
Protein accessionYP_737964 
Protein GI114047414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00132768 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG ATGTTCCTTT AATCAACGAA GCCCAAATTG GCTCCCGCTT AAATGCGGCA 
ATCGAACACA ACAGGCGAGG AGAGTTCGCC CTGTTGCTGT CGCTATTGTC TGCAGACGCG
AGGGACATGG CGCAGTTTCA ATGGCAAAAA GAGCTCGATA ATGCAGAAAA ATTACAACGT
CAGTTCGAGT TACCCCCAAA GCAAGCACTT GTGGCGGATT TATCGACGGA TAACAAGGTT
ACCGACAATA GTGCTGTTTT TGCTGAGCAA GGGGCGAGGG CGTTTCAACT GCAACAGGCA
TTGCGCCCAG AAGCATTAGT GATCCGCGGT GCTGAATCTA TCGCCATGGC CGAAGCCTTA
AGCAATTGCG ATCTCACCAC ACGTCTGCGC CAACGTGGCC AGTTGTCATC CCCGAAAATG
GACGTTATGC ATTTTGCCGA TCAACTGGCG ATTCAACGGA ACTTAGTGCC GTTATTGGCC
AGCGCCTAA
 
Protein sequence
MQIDVPLINE AQIGSRLNAA IEHNRRGEFA LLLSLLSADA RDMAQFQWQK ELDNAEKLQR 
QFELPPKQAL VADLSTDNKV TDNSAVFAEQ GARAFQLQQA LRPEALVIRG AESIAMAEAL
SNCDLTTRLR QRGQLSSPKM DVMHFADQLA IQRNLVPLLA SA