Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1906 |
Symbol | |
ID | 4258786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2250707 |
End bp | 2251405 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122561 |
Product | electron transport complex RsxE subunit |
Protein accession | YP_737952 |
Protein GI | 114047402 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATT ATCGCGAAAT TGCCTGGCAA GGACTGTGGA AAAACAACCC TGGCTTAGTG CAATTGCTGG GCCTGTGCCC CCTGTTAGCC GTAACGGCCA CTCTCACCAA CGCCCTCGGG CTTGGGGTTG CCACTATGTT GGTGCTGATA GGCTCAAACA TTTTAGTCTC GTTGGTACGT GACTATGTGC CCAAGGAAAT CCGTATCCCC GTGTTTGTGA TGATCATTGC CGCGCTGGTG ACGGCGGTGC AACTACTGAT CAACGCCTAC GCCTATGGCC TGTATTTGTC CCTAGGGATT TTCTTGCCGC TGATTGTGAC CAACTGCATT ATCATTGGCC GCGCAGAAGC ATTTGCCTCC CGTAATAATG CCTTTAGCGC TGCGTTCGAT GGACTGATGA TGGGGCTTGG CTTTACCTTA GTCTTAGCGG TTCTTGGCGC AACGCGCGAA ATTCTCGGCC AAGGCACCCT GTTTGATGGC GCCGACCAAC TACTCGGCCC ATGGGCTAAA GCCTTAACGA TTCAGGTATG GCAAGTCGAT ACCCCCTTCC TGCTGGCGAT GTTACCGCCT GGCGCCTTTA TTGTGATGGG CCTACTTATC GCCCTGAAAA ACGTTATCGA TAAAAAGCTT AAAGAGCGTC AACCCGAAGC GGCTGTACAA CCAAGTGTAA CTCGGGCACG GATCACCAAA GTGAGTTAA
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Protein sequence | MTNYREIAWQ GLWKNNPGLV QLLGLCPLLA VTATLTNALG LGVATMLVLI GSNILVSLVR DYVPKEIRIP VFVMIIAALV TAVQLLINAY AYGLYLSLGI FLPLIVTNCI IIGRAEAFAS RNNAFSAAFD GLMMGLGFTL VLAVLGATRE ILGQGTLFDG ADQLLGPWAK ALTIQVWQVD TPFLLAMLPP GAFIVMGLLI ALKNVIDKKL KERQPEAAVQ PSVTRARITK VS
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