| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1905 |
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| Symbol | |
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| ID | 4258785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2249999 |
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| End bp | 2250640 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122560 |
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| Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_737951 |
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| Protein GI | 114047401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAAG AAAAACGCAT CCAAATCCTC ACCCGCCTTC GCGAAAACAA TCCCAAACCC
GAAACCGAGC TGAATTTCTC CAGTCCCTTT GAATTACTGG TGGCGGTGAC TTTATCGGCG
CAGGCAACCG ATGTGAGCGT GAATAAGGCG ACTGATAAAC TGTTTCCAGT CGCCAATACC
GCCCACAGTA TTTATGCCTT AGGCGTGGAT GGATTAAAGG AATATATCAA GACGATTGGC
TTGTATAACA ACAAGGCCAT TAATGTGATT AAAGCCTGTG AGATCTTGAT TGAAAAATAC
AATGGCGAAG TTCCGGAGGA CAGAGAGGCG CTAGAGTCGC TTCCTGGTGT CGGTCGTAAA
ACCGCTAACG TGGTGCTCAA TACCGCCTTT GGCTGGCCGA CCATCGCCGT CGACACCCAT
ATCTTTCGCA TGGCAAACCG CACTAAATTT GCCCCCGGTA AAAACGTGGT CGAAGTCGAG
GAGCGCATGT TAAAGGTTGT TCCCGCCGAA TTTAAGGTCG ATGTACACCA CTGGTTTATT
CTGCATGGCC GCTATACCTG TCTGGCGCGC AAACCGCGCT GTGGGAGTTG CATAATTGAG
GACCTTTGCG AGTTTAAGGA AAAGGTCTAT CCCGAAGAAT AA
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| Protein sequence | MNQEKRIQIL TRLRENNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT
AHSIYALGVD GLKEYIKTIG LYNNKAINVI KACEILIEKY NGEVPEDREA LESLPGVGRK
TANVVLNTAF GWPTIAVDTH IFRMANRTKF APGKNVVEVE ERMLKVVPAE FKVDVHHWFI
LHGRYTCLAR KPRCGSCIIE DLCEFKEKVY PEE
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