| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1902 |
|---|
| Symbol | |
|---|
| ID | 4258782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2247081 |
|---|
| End bp | 2248313 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638122557 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_737948 |
|---|
| Protein GI | 114047398 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGA TACACACAAC AGTCAAAGTA GTAGGTTCAA AATGTAATTA TGATTGCCAA
TACTGTTTTT ATCTTGAAAA AGATTTGGTC CTAAACTCAA AAAAGGTTAT GAGTTTAGAC
GTGTTAGAGC GTTACATTCA AAACTATATT GCTAATCAAG ACTCTCAGAT TGTTGAGTTT
GCATGGCATG GCGGCGAGCC GACCTTAGCT GGACTCGATT TTTTTCGACA TGCTGTGGCG
TTGCAACGAA AATACGCACA AGACAAAATC ATTAAAAATA CCTTACAGAC CAATGGTTCT
AAACTCGATA AACAATGGTG CCAATTCTTT AAAGAAAATA ATTTTCTTGT AGGCCTGAGT
CTTGATGGCC CTGAATGGCT ACAAGCAACT TATCGCACTA AGCAAGGTAA AAGTGTGTTT
GATGAGAATC TGAAAGCTCT CAAGCTCTTG CAAAAAATGA ACGTTGAACA CAATGTGTTA
GCTTGTGTAA CGCAGGAATA TTGTCAACAC GCAGAGAGCA TTTATGCCTT TTTCAGAAAG
CATAAAGTGA AATACATTCA ATTCTCCCCT ATCGTCGAGT CTAAGCCCTC TGAACAAGAG
CAAGCCCGTG GCCAACATTT TTCCAGTAAT CTCATTTTAT CGACCGGTAA ACAAGCTGAA
GTGCATCAAC CTATGCCATG GTCCGTAAAC AGCAAAGATT ACGGTAAGTT CCTCGTCGAT
ATTTTCCAGC AGTGGATAAA ACAAGATGTC GGCAAAGTGT TTATTTCCAA TTTTGAGCAG
GCTTTAACTC AGTATATTGG CAATGACTCA CCCAATTGCA TTCACGCACA AGAATGTGGT
TCTTCCTACG CTATCGAGTC CAATGGAGAC GTCTATTTTT GTGACCATGT CGCCTATCCC
GAATCTCATC TCGGTAACAT CACCCTCCAC CCCTTAAAAC AAATAAAAGA ACATTCGACA
CAATTTCATT TTAACAAGCA ATCACGACTC TCCAATCGTT GTAAACAGTG CCGGTATTTA
AAAATGTGTA ATGGTGGTTG CCCTAAACAC CGTTATCTCG CCGCCAATGG TGAATATGAA
AATGTACTTT GCGAAGGATA CTTCTATTTC TTTCAGCAGA TAGAGAAGTA CTTACATGCC
ATGACTAGGT TATTAGCTAA CGGTTACCCC GCTAGTTATG TGATGCAAGC CTTAGATGGT
CCGTTAATCC TCACTACCTC CAACAAAAGG TAA
|
|---|
| Protein sequence | MTGIHTTVKV VGSKCNYDCQ YCFYLEKDLV LNSKKVMSLD VLERYIQNYI ANQDSQIVEF
AWHGGEPTLA GLDFFRHAVA LQRKYAQDKI IKNTLQTNGS KLDKQWCQFF KENNFLVGLS
LDGPEWLQAT YRTKQGKSVF DENLKALKLL QKMNVEHNVL ACVTQEYCQH AESIYAFFRK
HKVKYIQFSP IVESKPSEQE QARGQHFSSN LILSTGKQAE VHQPMPWSVN SKDYGKFLVD
IFQQWIKQDV GKVFISNFEQ ALTQYIGNDS PNCIHAQECG SSYAIESNGD VYFCDHVAYP
ESHLGNITLH PLKQIKEHST QFHFNKQSRL SNRCKQCRYL KMCNGGCPKH RYLAANGEYE
NVLCEGYFYF FQQIEKYLHA MTRLLANGYP ASYVMQALDG PLILTTSNKR
|
|---|
| |