Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1899 |
Symbol | |
ID | 4258779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2242854 |
End bp | 2244023 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122554 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_737945 |
Protein GI | 114047395 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.315417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAA TAAGTAATCG CTTCTGGTTT ATGTTACACG GTTGGGTATC TTTGCCCATC TGGATTTTAT TCAGTTTTAT CTGCTTAACG GGCACGGTTG CCGTACTCAG TCATGAACTG ACTTGGCTGA CCAACCCCGC AGCCCGTGCG CTCAATCCAG ATGAGCTACC CGCGAAACCC CTCGATGAAT TAATGCTGGT GGTCGAAAAA GCCTATCCGA ATGCGCAGGT GATGGGTGCT ATGACCTTTG AGCCTTACTT AATCAATGCG ATTACCTTTA CCGATGCCGA TAAACCTTAT GCTATCGCCT ATGTGAATCA ATATACGGGA CAAATTCAGC AGATAAACGA AGGACTAACC TTTATTGGCT TTATGCGTTC CTTACATGGT TGGTTGTTGT TTCCTTGGCA GAGCGGTTAC AGCGTCGGCT ATTACCTTGT TTGCTCTATG GCACTCATGA TGCTTGCCTC ATTGATTACT GGGTTAATCG TTTATAAGCG TTTTTGGCGC AGCTTTTTTG CACCCAAACT TAGACTTACC CAAGGGAAGA AGACCTTACT CTCTGATTTG CATAAATTAT CCGGCGTCTG GTCGATTTGG TTTATTGCGA TTATGAGCCT GACTGGGCTG TGGTATTTAG TCCAAGCTAT CTTCTGGCAT GCGGATATTG ATATCGAGCC CCATGCGCCT ATGATTGCCG CCGAGCAAGT GCCGCTGATG CAAGCGGGTG ATACGCAACT GCCAAGCGCC AATGTTTCTT TTACTGAGGC CTTAAGTTTA GCTAAGCAGC GCTTTCCCGA TTTTCAGCCA AGTTATGTGA TGCTACCTGA GCATCAACGG GATATGTATC ATCTGAGCGG TAGTGGCGAT CATATCTTCT ACGATCAATA TTCCTACAAT CTCAGTATCA ATCCGTGGAC GGGTGAGATT GCTAGCGCGA CCTCGCCAGA CACCATGACA GGTATGCAGA CCTTAATGCA TATTGCCGAT CCGCTGCATT ACGGCACCTT AGGCGGGATT TGGACTAAAT TGATTTGGTT CTTCTTTGGG CTAGTGCTTT CGGGGATGTC GATCACCGGT TTTATGATGT GGGGATTACG CCATGTCCGT GCCTTTAAAC AGGCCGAAAG CAAAGACTTA GCCGCAGATA TGTTAGGGGA GGCACGCTAA
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Protein sequence | MAKISNRFWF MLHGWVSLPI WILFSFICLT GTVAVLSHEL TWLTNPAARA LNPDELPAKP LDELMLVVEK AYPNAQVMGA MTFEPYLINA ITFTDADKPY AIAYVNQYTG QIQQINEGLT FIGFMRSLHG WLLFPWQSGY SVGYYLVCSM ALMMLASLIT GLIVYKRFWR SFFAPKLRLT QGKKTLLSDL HKLSGVWSIW FIAIMSLTGL WYLVQAIFWH ADIDIEPHAP MIAAEQVPLM QAGDTQLPSA NVSFTEALSL AKQRFPDFQP SYVMLPEHQR DMYHLSGSGD HIFYDQYSYN LSINPWTGEI ASATSPDTMT GMQTLMHIAD PLHYGTLGGI WTKLIWFFFG LVLSGMSITG FMMWGLRHVR AFKQAESKDL AADMLGEAR
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