| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1812 |
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| Symbol | |
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| ID | 4258397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2135317 |
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| End bp | 2136549 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122470 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_737861 |
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| Protein GI | 114047311 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0248293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTC GATTTCCTCT CTACGTTGGT TACCGTTATT GGCGGGCCAG AAAAGCAAAC
GCCTTTGCTT CTTTTATTAC CTTATTTGCC GTTTCAGGCA TTTTTTTAGG GGTGGCGGCC
TTAATCGTGG TCAGCTCGGT GATGAATGGC CTCGAAGGAC AATTAAAACA GCGCATTTTA
GGCGCCGTAC CGCAATTGAC CGTGGTGACT GAGACGCCGT TAAGCGATTG GACTATACCT
GCGGACAAAC TCAAAGCATT GCCTGGCGTG CAGGGCGTGA CACCGAGTGT GTCGACTCAA
GCCATGGTGC AGTCGGCGGC GAATATCCGC GCCGTGCAAG TGTTTGGGGT GTTTCCAGAG
CTTGCCGAAA AACTCTCTAT GGTGGCGCAG CATACCTATT CGGGCGCGTT TAACGAGCTA
ACCAGTGGCC AATATAAGGT CATTTTAGGC AGCGAGCTTG CACGCCAATT AAAGGTGAGC
CCGGGTGATA CCGTGCGCCT GTTAAGTGGC GATGGCGTAG TGTACTCGCC GCTCGGCCCA
GTCCCGAGCC AACGTAAGTT TTTAGTGTCC GCCGTGTTTG AGATGGGCTC ACAGGTAGAT
GCGGGCGTTG CCTATATTCA TTATCAAGAT GCCAAACGTT TAATGCGTCA ACCGAGCGAT
GAAATCAATC AATTAAGACT GTATTTGAGC GATCCTTTTA TGGCGCCAGC ACTGGCTAAG
GATGTAAAGC AGGTTCTTAC ACAGCAGGGC ATCGAGGCGA CGACCAGTGA TTGGCGCGAC
ACCTATGGTC ATCTGTTTAG TGCCGTGAAG ATGGAAAAAA ACATGATGTC GCTGATGTTG
AGCCTGATTG TGGCCGTAGC GGCGTTTAAT ATAGTGTCAG CACTGGTGAT GATGGTGGTG
GATAAAACCA CCGACGTGGC GGTACTCAAA ACCCAAGGCT TACGTACCTC GGCGGTGATG
GGCATTTTTG TGGTGCAAGG TTTATTGAAT GCGGTATTAG GTTTAGTACT GGGGCTGGTG
GTCGGTATTC TGCTCACCCT TAATTTGAAT GGCATTATGG CGACCCTCGG GATTTCCATT
TTAGGCACTG GACAAGTGCT GCCAGTTAAA TTGGAGCTGG GCCAATTGTC GATGATTATT
GTTGGCACCT TAGTCGTGAC CTTAGTGGCG ACCCTTTACC CCGCATTGCG GGCGGCGCGG
GTGCAACCTG CCACGGCGCT GCGTTACGAA TAG
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| Protein sequence | MDLRFPLYVG YRYWRARKAN AFASFITLFA VSGIFLGVAA LIVVSSVMNG LEGQLKQRIL
GAVPQLTVVT ETPLSDWTIP ADKLKALPGV QGVTPSVSTQ AMVQSAANIR AVQVFGVFPE
LAEKLSMVAQ HTYSGAFNEL TSGQYKVILG SELARQLKVS PGDTVRLLSG DGVVYSPLGP
VPSQRKFLVS AVFEMGSQVD AGVAYIHYQD AKRLMRQPSD EINQLRLYLS DPFMAPALAK
DVKQVLTQQG IEATTSDWRD TYGHLFSAVK MEKNMMSLML SLIVAVAAFN IVSALVMMVV
DKTTDVAVLK TQGLRTSAVM GIFVVQGLLN AVLGLVLGLV VGILLTLNLN GIMATLGISI
LGTGQVLPVK LELGQLSMII VGTLVVTLVA TLYPALRAAR VQPATALRYE
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