Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1787 |
Symbol | |
ID | 4258511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2108324 |
End bp | 2111359 |
Gene Length | 3036 bp |
Protein Length | 1011 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638122446 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_737837 |
Protein GI | 114047287 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.990163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.226288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGTA GTACTAACGA GCAGGCGTTA GAGGCTAGTA TTGAAAGAGC CCTCACAGGT CATTGCCTTG AAGATCAAAA AGCAGGCATT TCTGATGGGA TTGTTACGCC ATATGGTGTG AACCATTGCG GCTACTCATC AGGCTACTCA TCAGATTTCA ATATGCAATA TGCCATTGAT GAACGTTTCT TCTGGCAATT TCTGCAAAAG ACACAAGAAG TAGAGCTGGC CAAACTGCAA AAGAACAATC CCTCAGATTG GCAGCGTAAG TTACTCGAAC GATTTGACCG ATTGATTAAG AAGCATGGCA TTCTTCATTT ACTTAAGAAA GGGCTAAGCG TAGACGATGC TCATTTCAAT TTGCTCTATC CAGCCCCTCT GGCAAGCAGT AGTGAGAAGG TAAAGCAAAA CTTTGCAGAC AATGTGTTTA GTTGTACTCG CCAAGTGCGC TATTCCATGG CAAATCCCCT ACAAGAAATC GACATGGTAT TGTTTATCAA CGGAATACCA TTGATAACGC TGGAGTTGAA GAACGCATGG ACGGGGCAAA CAGCACGTTA TCACGGCCAA AAGCAGTATC GAGATGACCG AGATGCAACT CAGCCATTGC TGACCTTTGG CCGCTGCCTA GTGCATATGG CGGTCGATAC CGACGAAGTG TATATGACTA CCAAGTTATC AGGTGGCAGT ACTTTCTTCT TGCCGTTCAA TAAAGGACAC AATCTTGGAC AGGGTAATCC ACCTAACCCA ACTGGCCATA AAACGGCATA CCTATGGCAA GAAGTATTCA CTAAAGAAAG CTTGGCGAAT ATTATTCAGC ATTTTGTGCG TCTGGATGGG TCAAGCAAAG ATCCATTACC AAAGCGAACC TTATTCTTTC CTCGATACCA CCAATTGGAT GTGGTGAGAA AATTAGTAGA CCATGCTGCC CAGCACGGTG TCGGTCAGAC TTACTTAATT CAACACTCTG CCGGTTCAGG TAAGTCTAAT TCGATTACTT GGGCTGCTTA TCAGTTAATT GAAACCTATC CTGCTTCGTC TGATGTGGCC GGTGGAAAAA GCCTGGAGCA GCCGTTGTTT GACTCTGTAA TTGTGGTTAC CGATAGACGC TTATTGGACA AGCAGCTGCG GGATAACATT AAAGAGTTTT CTGAAGTAAA GAACATTATT GCCCCGGCGA ACAAGTCTTC TGAGCTTAAG CAAGCGCTGG AGAATGGCAA AAAGATCATT ATAACGACGA TTCAGAAATT CCCGTTCATT ATTGATGGTA TCGCCGATCT TAGTGACAAG CGCTTTGCGG TGATTATCGA TGAAGCACAC AGCTCACAGT CTGGTTCGGC GCATGACAAT ATGAACCGAG CGATGGGTAA GTCTGAAGTC GAAGAGGCAG AAGATGCTCA GGATAAAATC CTTCAGGCGA TGAAATCGCG CAAGATGCGC GGGAATGCGT CGTACCTGGC ATTTACAGCG ACACCAAAAA ACAGCACTTT GGAGAAATTT GGTCAACGCC AAGAAGATGG CCCTTTCAAG CCGTTTCACT TGTATTCGAT GAAACAAGCC ATTGAGGAAG GCTTCATCTT AGATGTGCTG GCAAATTATA CGACGTACAA AAGTTATTAT GAGATTGAGA AATCAATCGC TGATAACCCT GAGTTTGATA CCAAAAAGGC GCAGAAAAAA CTCAGAGCTT ATGTAGAGCG AAGCCAGCAA ACGATTGATA CCAAGGCAGA AATTATGCTG GAGCATTTTG TTCCACATGT CGTGAATGCG AAAAAGCTCA AAGGTAAAGG TAAGGCAATG GTGGTCACTC AAAATATTGA GACGGCCATT CGATACTACA AAGCGATTAA GCGGATACTT GAGGAGCAAG GAAACCCGTT TAAAGTTGCC ATTGCTTTCT CAGGAACCAA AGAAGTTGAC GGTATTGAAT ATACCGAAGC AGATATTAAT GGTTTTGCCG AGTCAGATAC CAAAGATATG TTTGATACCG ATGAGTATCG ACTTTTAGTG GTTGCTAACA AGTATCTGAC TGGGTTTGAC CAGCCTAAGC TTTGCGCCAT GTATGTGGAC AAGAAGCTCG CCAGTGTCTT GTGTGTACAG ACATTGTCTC GTCTCAATCG AAGTGCGCCA AAATGGGGTA AAAAAACAGA AGACCTGTTT GTTTTAGACT TTTTCAACTC GGTTGAAGAT ATTCAGTCAG CATTCGATCC TTTCTACACA GCAACGTCAT TGTCGCAGGC TACAGATATA AACGTGCTGC ACGAGTTGAA GGATGAAATG GACGATGTCG GTGTGTACGA GTGGTATGAA GTTGAAGACT TTGTGACGCG TTATTTCAAG AATGAAGACG CCCAGACACT CAGTCCAATC ATTGATGTTG CAGCAGCACG GTTTGACCAT GAGCTGGAGC TTGAAGCTGA AGCTAAAGTG GACTTTAAGA TTAAAGCCAA GCAGTTCGTG AAAATCTATG GGCAGATGGC GTCTATCATG CCTTATGAAA TGGTCAGCTG GGAAAAACTG TTTTGGTTCA TGAAGTTTTT AATACCGAAA TTGAAAGTGG AAGATCCCGA TGCAGATGCT ATTGATGAGC TTCTCGATTC TGTCGATCTG AGTTCATACG GTTTGCAACG TGTGAAGCTT AACCACAGCA TTAAGCTTAG TGACCAAGAA GCGGAGCTTG ATCCTCAAAA TCCGAACCCA CGTGGGGCGC ATGGCGGTGA AAAAGAAACT GACCCGCTGG ATGAAATCAT TCGAACATTT AATGAACGAT GGTTCCAGGG CTGGAGTGCC ACACCTGAAG AGCAAAAGGT TAAGTTCGTG AACATCGCTG AGAGTATCCG CAATCACCCA GATTTTGAAT CTAAATACAA AAACAACCCA GATCCTCATA ATCGAGATTT GGCCTTCGAA AAAATGCTCA AGGAAATTAT GCTGCAACGC CGTAAAGATG AACTTGAGCT CTACAAGTTG TTCGCAGGAG ATTCAGCATT TAAAGCCTCG TGGACGCAAA GTATGCAACG AATGGTAGGT ATGTAG
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Protein sequence | MVSSTNEQAL EASIERALTG HCLEDQKAGI SDGIVTPYGV NHCGYSSGYS SDFNMQYAID ERFFWQFLQK TQEVELAKLQ KNNPSDWQRK LLERFDRLIK KHGILHLLKK GLSVDDAHFN LLYPAPLASS SEKVKQNFAD NVFSCTRQVR YSMANPLQEI DMVLFINGIP LITLELKNAW TGQTARYHGQ KQYRDDRDAT QPLLTFGRCL VHMAVDTDEV YMTTKLSGGS TFFLPFNKGH NLGQGNPPNP TGHKTAYLWQ EVFTKESLAN IIQHFVRLDG SSKDPLPKRT LFFPRYHQLD VVRKLVDHAA QHGVGQTYLI QHSAGSGKSN SITWAAYQLI ETYPASSDVA GGKSLEQPLF DSVIVVTDRR LLDKQLRDNI KEFSEVKNII APANKSSELK QALENGKKII ITTIQKFPFI IDGIADLSDK RFAVIIDEAH SSQSGSAHDN MNRAMGKSEV EEAEDAQDKI LQAMKSRKMR GNASYLAFTA TPKNSTLEKF GQRQEDGPFK PFHLYSMKQA IEEGFILDVL ANYTTYKSYY EIEKSIADNP EFDTKKAQKK LRAYVERSQQ TIDTKAEIML EHFVPHVVNA KKLKGKGKAM VVTQNIETAI RYYKAIKRIL EEQGNPFKVA IAFSGTKEVD GIEYTEADIN GFAESDTKDM FDTDEYRLLV VANKYLTGFD QPKLCAMYVD KKLASVLCVQ TLSRLNRSAP KWGKKTEDLF VLDFFNSVED IQSAFDPFYT ATSLSQATDI NVLHELKDEM DDVGVYEWYE VEDFVTRYFK NEDAQTLSPI IDVAAARFDH ELELEAEAKV DFKIKAKQFV KIYGQMASIM PYEMVSWEKL FWFMKFLIPK LKVEDPDADA IDELLDSVDL SSYGLQRVKL NHSIKLSDQE AELDPQNPNP RGAHGGEKET DPLDEIIRTF NERWFQGWSA TPEEQKVKFV NIAESIRNHP DFESKYKNNP DPHNRDLAFE KMLKEIMLQR RKDELELYKL FAGDSAFKAS WTQSMQRMVG M
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