Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1765 |
Symbol | |
ID | 4258789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2086443 |
End bp | 2086655 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122424 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_737815 |
Protein GI | 114047265 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.993884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.447996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCCA ACATCCCAAG CTTCACCATC ATCAGATTAA AGAAAGTCAT GGATTTGACT GGCCTGTCTC GTTCAACCAT ATACGACAAA ATAAATCCCG CGTCTCCACG TCATGACCCA CTTTTTCCGC GAAAAGTAGG TCTTGGTGCT CGTGCCGTTG GTTGGTACAT GCAAGAAGTC GAACAGTGGC TGCAAGCACG TAAGTGCTGC TGA
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Protein sequence | MEPNIPSFTI IRLKKVMDLT GLSRSTIYDK INPASPRHDP LFPRKVGLGA RAVGWYMQEV EQWLQARKCC
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