Gene Shewmr7_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1765 
Symbol 
ID4258789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2086443 
End bp2086655 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content48% 
IMG OID638122424 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_737815 
Protein GI114047265 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.993884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.447996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCA ACATCCCAAG CTTCACCATC ATCAGATTAA AGAAAGTCAT GGATTTGACT 
GGCCTGTCTC GTTCAACCAT ATACGACAAA ATAAATCCCG CGTCTCCACG TCATGACCCA
CTTTTTCCGC GAAAAGTAGG TCTTGGTGCT CGTGCCGTTG GTTGGTACAT GCAAGAAGTC
GAACAGTGGC TGCAAGCACG TAAGTGCTGC TGA
 
Protein sequence
MEPNIPSFTI IRLKKVMDLT GLSRSTIYDK INPASPRHDP LFPRKVGLGA RAVGWYMQEV 
EQWLQARKCC