Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1751 |
Symbol | |
ID | 4256278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2060442 |
End bp | 2062484 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122409 |
Product | hypothetical protein |
Protein accession | YP_737801 |
Protein GI | 114047251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00124169 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG TTAAAAAAAG TTTTAACAAG TCGGCGCTTG CTTTGGGGGT GGCGTCGGCA TTGAGTTTAT TGATGGTGTC GAATGTTAAT GCGGTTGCGT TCGATTGGGG GGAGATACAA GGGACTTTTG ACTCGACTTG GACTGCTGGT GCCAGTTGGC GTGTAGGGGA GCGCGATTGG GATGGACAAA TTGGTAAGGT AAACCAGCCG CAGTTTGATT GGTCTAATTA CACTGCATTT GGCAATACCA AATACACATC TGCTGAGATT TGGGCACAAC CAGGTTCTTA TTCTAGTAAC AACGATTTGA GTAATTTACT TTATTCTCAA GGTGATACTA CATCCGAAAT CGTTAAAGGA TTACACGAGT TATCCCTAAA GTATGAGAAC TATGGTCTAT TCGTTCGTGG CATGTATTTC TACGATCGTA AGCTAAACAA TGGTAACTAC GACTACAATG ACCCGTTAAC TGGGAAAGAA TACGATCCTT GCCGCGACAG TAAAGCGTCT GAAGTGCAAT GTAAGGACAT CCGTCTGCTG GATGCCTTCG TCTACGCGAA TTTTGATTTA AACGATGGTG CTAACCCGCT TTCTATCCGT GTCGGTAACC AAGTGGTTTC TTGGGGTGAA AGTACGCTGA TCGCCCACGG TATTGGTGAA ATCAACCCTG TCGATTTGAA CATCCTGAAC GCGCCTGGCG CGGAACTCAA AGAAGCCTTC CGTCCTCAGG GTATGGTGTG GGCCTCATTG GGGATCACCG AAAACCTATC GGTAGAAGGT TTCTATCAAT ATGATTGGGA ACCCGTTTGG ATCCCAACCC CTGGTTCGAT TTTTGCGACT AACGATTTCG CTGGTTACGG TGGTTATAAC CAGAACGCGC AGTTAGGCTT TAACGCTAAC CCAGACATCA ATTTAGACTT CTTAACGCAG GAATATCAGA AACTGGCTGG GATGATCGCC AGTGGTCAAA CTATTCCTAC ACAGCAATTG GTGGCGATGG CACTGGCTTA TCCGACTAAA GTGACGTTAG TGCAAGATGA GCAAGCGCCA AGCAACGGTG GCCAATATGG TATCAAGCTG GGTTATTACG CCCCTGAGTT AGGCGATACA GAGTTTGGTT TCTACTTTAT GAACTACCAC AGCCGTCGTC CGTTGATCAG CGGTACAGCC GCCGACTTTA GCACTGGCGC ACTGTTGTCA GATCTTGCGG TACTGGGTCA AAACGCGGGT GATATTAACC GCGAATTGCT GCTCAGCTTA AAGAGCTTCT CTAAGGCGCA AATTGTTTAC CCTGAAGACA TTAAGCTCTA TGGCTTCAGC TTTAACACTT CGCTTGGCGA TACTTCAGTC GGTGCTGAAA TCGCTCACCG TCAAGACGAA CCGCTGCAAA TCGATGACGT AGAACTGCTG TTTGCGGGTA TGCCACAACA GTTAGCCAAT GCGGGCATTC GCCCCGATTT CGACGGCATT TCACAGATTG ATGGCGTAAA ACCTGGCGAA ACCGTTGACG GTTTTATTCG CCTGGATACC ACTCAGGCGC AAGTCACTTT CACTCACTTA TTCGGTCCTA CCTTGGGATT GGATAACCTG ACGATGTTGG CTGAAGTCGG TGGGGTATGG ATCCACGATA TGCCAGGTTT TGATGAACTG CGTCTCAACG GCCCAGGTAC CGCACGTTCT GGCGGAAATC CAGATATGCC AGGCATCATC CAAGCCCTGC ACAATGGCCC TGAAACCAAC CCATTCCCAA CGGATTTCGC GTGGGGATAC CGTCTGGTGG CAAAAGCGGA CTTTAACAAC TTGTTTGCGG GTGTAAACAT GTCACCACGG TTGATTTTCT CACACGATGT TGACGGTATT ACGCCTGATC CTATGTTCCT CTTTACCGAA GGACGTAAGT CAGTGGCCTT GGGTCTGAAT TTTGAGTACC AAAACCGTTG GGGCGCAGAC TTATCCTACA ACAACTTCTT TGGCGGTGTA GGAACAACCA ACGCGATGTC AGATCGTGAT TATATTTCTT TCAATATCAA GTATTCGATC TAA
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Protein sequence | MKIVKKSFNK SALALGVASA LSLLMVSNVN AVAFDWGEIQ GTFDSTWTAG ASWRVGERDW DGQIGKVNQP QFDWSNYTAF GNTKYTSAEI WAQPGSYSSN NDLSNLLYSQ GDTTSEIVKG LHELSLKYEN YGLFVRGMYF YDRKLNNGNY DYNDPLTGKE YDPCRDSKAS EVQCKDIRLL DAFVYANFDL NDGANPLSIR VGNQVVSWGE STLIAHGIGE INPVDLNILN APGAELKEAF RPQGMVWASL GITENLSVEG FYQYDWEPVW IPTPGSIFAT NDFAGYGGYN QNAQLGFNAN PDINLDFLTQ EYQKLAGMIA SGQTIPTQQL VAMALAYPTK VTLVQDEQAP SNGGQYGIKL GYYAPELGDT EFGFYFMNYH SRRPLISGTA ADFSTGALLS DLAVLGQNAG DINRELLLSL KSFSKAQIVY PEDIKLYGFS FNTSLGDTSV GAEIAHRQDE PLQIDDVELL FAGMPQQLAN AGIRPDFDGI SQIDGVKPGE TVDGFIRLDT TQAQVTFTHL FGPTLGLDNL TMLAEVGGVW IHDMPGFDEL RLNGPGTARS GGNPDMPGII QALHNGPETN PFPTDFAWGY RLVAKADFNN LFAGVNMSPR LIFSHDVDGI TPDPMFLFTE GRKSVALGLN FEYQNRWGAD LSYNNFFGGV GTTNAMSDRD YISFNIKYSI
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