Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1744 |
Symbol | |
ID | 4257701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2052332 |
End bp | 2052967 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122402 |
Product | paraquat-inducible protein A |
Protein accession | YP_737794 |
Protein GI | 114047244 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.457122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGAAA ATACAGTAGA AAACTCTGTA ATCCTCTGTC GTTCCTGCGA CTTGGCCATT CGAAAGCGCG CCTTACCTAC GGGTGTTAGG GCGTTATGCC CGCGCTGCAG CACCGCACTT TATGACACTC CATACTGCTC AGTAAACGGT ATGTTGGCGC TATGTATAAC CGCGCTAGTG TTCTATTTTC CCGCTAATTT TTTTCCGGTA CTCGAAATTC ACTTTTTGGG TAGCATTCGC ACCACTACAG TGTTTCAGGG CGCCTTTGCG GTGTTCGACC AAGGTTATTG GGTCGTGGGA TTAGCCGTGC TCGCCGCCGC CGTGATTGGC CCAGGGTTAT TGATCCTGTC GATCCTTAGC CAGATTTTGA TCGTCAAATG GGGACTTAGC AGTCCATTTT GGCGCCGCAG CCTCAAACAG TTATTAAAGC TGCAAGGGCT GCTATCCCAG CTCACCATGC TGGAGATTTA TGTGATTAGC TTTTTGGTGT CCTCATTTCA GTTATCTGAT TTCTCGGATA TTTACTTCGG TATGGGCACC TTCTGCTTCA CCATGCTTTT TTTAGTCACC CTGTTTTTGC AGCGTGAATA CGATATTGAG CATATGTGGA GTCTTCTCAT GCAGGAGCGA CACTAA
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Protein sequence | MHENTVENSV ILCRSCDLAI RKRALPTGVR ALCPRCSTAL YDTPYCSVNG MLALCITALV FYFPANFFPV LEIHFLGSIR TTTVFQGAFA VFDQGYWVVG LAVLAAAVIG PGLLILSILS QILIVKWGLS SPFWRRSLKQ LLKLQGLLSQ LTMLEIYVIS FLVSSFQLSD FSDIYFGMGT FCFTMLFLVT LFLQREYDIE HMWSLLMQER H
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