Gene Shewmr7_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1744 
Symbol 
ID4257701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2052332 
End bp2052967 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID638122402 
Productparaquat-inducible protein A 
Protein accessionYP_737794 
Protein GI114047244 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.457122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA ATACAGTAGA AAACTCTGTA ATCCTCTGTC GTTCCTGCGA CTTGGCCATT 
CGAAAGCGCG CCTTACCTAC GGGTGTTAGG GCGTTATGCC CGCGCTGCAG CACCGCACTT
TATGACACTC CATACTGCTC AGTAAACGGT ATGTTGGCGC TATGTATAAC CGCGCTAGTG
TTCTATTTTC CCGCTAATTT TTTTCCGGTA CTCGAAATTC ACTTTTTGGG TAGCATTCGC
ACCACTACAG TGTTTCAGGG CGCCTTTGCG GTGTTCGACC AAGGTTATTG GGTCGTGGGA
TTAGCCGTGC TCGCCGCCGC CGTGATTGGC CCAGGGTTAT TGATCCTGTC GATCCTTAGC
CAGATTTTGA TCGTCAAATG GGGACTTAGC AGTCCATTTT GGCGCCGCAG CCTCAAACAG
TTATTAAAGC TGCAAGGGCT GCTATCCCAG CTCACCATGC TGGAGATTTA TGTGATTAGC
TTTTTGGTGT CCTCATTTCA GTTATCTGAT TTCTCGGATA TTTACTTCGG TATGGGCACC
TTCTGCTTCA CCATGCTTTT TTTAGTCACC CTGTTTTTGC AGCGTGAATA CGATATTGAG
CATATGTGGA GTCTTCTCAT GCAGGAGCGA CACTAA
 
Protein sequence
MHENTVENSV ILCRSCDLAI RKRALPTGVR ALCPRCSTAL YDTPYCSVNG MLALCITALV 
FYFPANFFPV LEIHFLGSIR TTTVFQGAFA VFDQGYWVVG LAVLAAAVIG PGLLILSILS
QILIVKWGLS SPFWRRSLKQ LLKLQGLLSQ LTMLEIYVIS FLVSSFQLSD FSDIYFGMGT
FCFTMLFLVT LFLQREYDIE HMWSLLMQER H