Gene Shewmr7_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1736 
Symboltmk 
ID4257693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand+ 
Start bp2042599 
End bp2043228 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID638122394 
Productthymidylate kinase 
Protein accessionYP_737786 
Protein GI114047236 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.603767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CATCCGCCAA ATTCATCGTT GTTGAAGGAC TGGAAGGCGC AGGCAAATCG 
AGTGCGATTG CCCTGATCCG CGATTTCATT GAAAAGCACA CCGGCCTCGC ACCTGTTTGC 
ACCCGCGAGC CAGGCGGTAC GCCGCTGGCC GAGCGTATTC GTGACTTAGT AAAAATTGCC 
GACCCAAGCG ATCCTCTGTG TGATGAGTCT GAATGTTTAT TGATCTACGC CGCTAGAGCT 
CAGCTCGTCG CCAATGTGAT CAAACCTGCG CTGGCAGAAG GCAAGTGGGT GTTAGGGGAT 
AGGCATAATT TGTCGTCCTT AGCTTACCAA GGCGGTGGAC GCGGCTTAAT GCCCTTAGTC 
GAAGCCGTGA GTAACGCGAC GCTCAAAGGT TTTAAACCCG ATCTAACCCT CTATCTTGAC 
CTTGATCCTA AGCTTGGGCT GCAGCGCGCA GCAAAGCGGG GCGAGCTTGA TAGAATCGAG 
CAACAAGCCA TCGATTTTTT TGAACGGGCG CGCGCAACTT ACCTCAAGCT TGCCAGCGAA 
GATGAGCAGA TTGTCGTCAT TGATGCCAGC CAAACCATGG CCGAAGTGCA TAAAGATATT 
CTGGCCGTGT TACAGGCGAT GGCATGGTAA
 
Protein sequence
MTQASAKFIV VEGLEGAGKS SAIALIRDFI EKHTGLAPVC TREPGGTPLA ERIRDLVKIA 
DPSDPLCDES ECLLIYAARA QLVANVIKPA LAEGKWVLGD RHNLSSLAYQ GGGRGLMPLV 
EAVSNATLKG FKPDLTLYLD LDPKLGLQRA AKRGELDRIE QQAIDFFERA RATYLKLASE 
DEQIVVIDAS QTMAEVHKDI LAVLQAMAW