| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1733 |
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| Symbol | dcd |
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| ID | 4257690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2040199 |
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| End bp | 2040780 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122391 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_737783 |
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| Protein GI | 114047233 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00151185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTTAA CCGATATCGA AATTGAACAG GCCCTTGATA ACGGCACGAT TGTGATTGAA
CCTCGCCCAA GCAACGATGC GATTTCTGGT GTGAGTGTCG ATGTGCGATT AGGGGGGCAA
TTTCGCGTCT TTAAAGATCA TACCGCGCCT TTTATCGACC TGAGTGGTCC GAGTCCGGAA
GTGCAGGCGG CGCTTGATCG GGTGATGAGC GAAATCATTG AAATCCCGGA CGGCGAAGCC
TTCTTCCTCC ATCCCGGCGA ATTGGCGCTC GCCGTGACCT ATGAAAGCGT GACGCTGCCC
GCAGATATCG TCGGTTGGCT CGATGGCCGC TCTTCACTGG CGCGTTTAGG CCTGATGGTG
CACGTCACTG CACACCGAAT TGATCCGGGT TGGCAGGGTA AAATCGTGCT CGAGTTTTAT
AACAGTGGTA AGTTGCCTTT AGCGCTGCGT CCACGGATGA CTATTGGCGC ATTAAACTTT
GAACGTTTAA GTGGCCCAGT GGCGCGTCCT TACAACAAGC GTAAAAACGC GAAATATAAA
GATCAGCAAG ATGCGGTCGC CAGCCGTATC AGTCAGGACT AA
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| Protein sequence | MRLTDIEIEQ ALDNGTIVIE PRPSNDAISG VSVDVRLGGQ FRVFKDHTAP FIDLSGPSPE
VQAALDRVMS EIIEIPDGEA FFLHPGELAL AVTYESVTLP ADIVGWLDGR SSLARLGLMV
HVTAHRIDPG WQGKIVLEFY NSGKLPLALR PRMTIGALNF ERLSGPVARP YNKRKNAKYK
DQQDAVASRI SQD
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