Gene Shewmr7_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1717 
Symbol 
ID4256558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2025749 
End bp2026489 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID638122375 
ProductNAD-dependent deacetylase 
Protein accessionYP_737767 
Protein GI114047217 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000104436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAGC ATATTGTGGT GTTAACTGGC GCAGGTATTT CGGCCGAATC GGGATTGCGT 
ACCTTTCGCG ACCAAGATGG TTTATGGGAG GAGCATCATA TTGAAGATGT GGCAACCCCT
GAAGGTTATG CCCGCGATAC CGAACTGGTT GAACGTTTTT ATAACAGCCG CTGGGAGCAA
TTACACAGTG GCACAGTGAT GCCCAATGCG GCACATATTG CGTTGGCTAA GTTAGAGGCT
GAATTTCCTG GTCAATTATT GATTGTGACC CAAAATATTG ACGACCTACA CGAACGTGCG
GGTTCTCGTC GTTTGTTGCA CATGCATGGC GAATTGTCCA AAGGTCGCTG CCCACGTTCT
CGTCAAACTT TCTTATTAAG GGAACCCTTC GGCCCCAATA ACTGTTGTAC TTGCTGCATT
CCGGCCCAAC GATTACGTCC CCATGTAGTG TGGTTTGGTG AGATGCCGCT GGGGATGGAC
AGGATCCACG ATGCCCTCGA TAACTGCGAT TTGTTCATTG CCATTGGTAC GTCGGGCACT
GTGTATCCGG CGGCAGGGTT TGTTGATACG GCCAATCATC ATGGCGCGCA AACGGTGGAA
GTAAATTTAG TCACACCCGA TAGACACAGC CAGTTCCAAT ATCATTTAAC CGGTAAGGCA
GGGGATTTGG TGCCTAAATT GGTCGATACC ATACTCGCTG GCAAAGTGAT TGGCTCCGAT
TTAGCCGAGT CCGATGTTTA A
 
Protein sequence
MYQHIVVLTG AGISAESGLR TFRDQDGLWE EHHIEDVATP EGYARDTELV ERFYNSRWEQ 
LHSGTVMPNA AHIALAKLEA EFPGQLLIVT QNIDDLHERA GSRRLLHMHG ELSKGRCPRS
RQTFLLREPF GPNNCCTCCI PAQRLRPHVV WFGEMPLGMD RIHDALDNCD LFIAIGTSGT
VYPAAGFVDT ANHHGAQTVE VNLVTPDRHS QFQYHLTGKA GDLVPKLVDT ILAGKVIGSD
LAESDV