| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1712 |
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| Symbol | sucC |
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| ID | 4256553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2021592 |
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| End bp | 2022758 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122370 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_737762 |
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| Protein GI | 114047212 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00288074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGC ATGAGTATCA GGCAAAATCC CTATTTGCCG AATATGGTTT ACCAGTGTCA
GAAGGTTTTG CATGTGATAC AGCCCAAGAA GCTGTAGAAG CGGCAGGCCG TATTGGCGGA
AATTTATGGG TTGTTAAGTG TCAAGTACAC GCCGGCGGCC GCGGTAAAGC GGGTGGCGTT
AAAGTCACTG GCGATAAAGA AGAAATCAGA GCCTTTGCCG AACACTGGTT AGGCAAAAAT
CTGGTGACTT ATCAAACAGA TGAGAAAGGT CAGCCTGTTG CTAAAATTTT AGTAGAAAGC
TGCACCGACA TCGCTAACGA ACTGTACTTA GGTGCAGTAG TTGACCGTGC TACCCGTCGC
GTGGTGTTCA TGGCTTCTAC CGAAGGTGGT GTTGAGATTG AGAAAGTGGC CGAAGAAACG
CCAGAACTCA TTCACAAAGC GATCATCGAT CCACTGACTG GTCCTCAACC ATACCAAGCA
CGTGATCTTG GCTTCAAACT GGGCTTAAAC CCAACTCAAA TGAAGCAATT CACCAAGATC
TTCATGGGTC TGGCGACTAT GTTCGTTGAT CACGATTTTG CACTGCTGGA AATCAACCCA
CTGGTTATCA CCACTGAAGG TAACCTGCAC TGCTTAGACG GTAAAATTGG TATCGATGGT
AACGCACTGT TCCGTCAACC AAAAATCAAA GCAATGCACG ATCCATCACA GGATGACGCC
CGTGAAGCTC ACGCTGCAAT GTTCGAACTG AACTATGTTG CGCTGGACGG AAACGTGGGT
TGTATGGTGA ACGGTGCTGG CCTAGCAATG GGTACTATGG ACATCGTTAA CCTGCACGGC
GGCAAGCCAG CTAACTTCCT CGACGTAGGT GGTGGCGCGA CTAAAGAACG TGTTGCTGAA
GCATTCAAGA TCATTCTGTC TGACAGCAAT GTGAAAGCCG TTCTGGTTAA CATCTTCGGT
GGTATCGTAC GTTGTGACAT GATCGCAGAA GGTATCATTG GCGCTGTTAA AGAAGTTGGC
GTTAAAGTTC CAGTTGTAGT GCGTTTAGAA GGTACTAACG CTGAATTAGG CCGTGAAGTA
TTAGCTAAAT CAGGTCTTGA TATCATTGCA GCTAACAGTC TGACTGATGC GGCTGAGCAA
GTAGTTAAAG CTGCGGAGGG CAAATAA
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| Protein sequence | MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGRIGG NLWVVKCQVH AGGRGKAGGV
KVTGDKEEIR AFAEHWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR
VVFMASTEGG VEIEKVAEET PELIHKAIID PLTGPQPYQA RDLGFKLGLN PTQMKQFTKI
FMGLATMFVD HDFALLEINP LVITTEGNLH CLDGKIGIDG NALFRQPKIK AMHDPSQDDA
REAHAAMFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV
LAKSGLDIIA ANSLTDAAEQ VVKAAEGK
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