Gene Shewmr7_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1673 
Symbol 
ID4255093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1974186 
End bp1975220 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID638122332 
Productleucine dehydrogenase 
Protein accessionYP_737724 
Protein GI114047174 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0226874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTAT TTAATCATGT ATCCTTTGAT GAGCATGAAC AGGTCGTATT CTGTCATGAT 
AAAGAGAGTG GCTTAAAGGC CATCGTTGCC ATCCATAACA CCAATTTAGG TCCTGCTGTG
GGTGGTTGCC GGATGTGGAA CTACCAATCC GACGATGAAG CCCTGACAGA CGTATTACGC
CTCTCCCGCG GTATGACTTA CAAAAACGCC CTCGCAGGTT TAACCATGGG TGGTGGTAAG
TCAGTGATTA TTGCCGATCC TAAGCGCCCT GATCGCGAAG CCCTCTTCCG TGCGTTTGGC
CGTTTTATCA ATAGCCTGGG TGGACGTTAC TATTCAGCAG AAGACGTAGG TACCACAACA
GCGGATATCA TGATCGCTCA CCAAGAAACC CCATACATGG CGGGCCTTGA AGGCAAGAGC
GGCGATCCAT CCCCCTTTAC TGCATTAGGC ACCTATTTAG GCATCAAAGC TGCCGTTAAA
CACAAACTCG GTTTAGACAG CTTAAAAGGC CTTAAGATTG CCGTTCAAGG TGTGGGCCAT
GTGGGTTACT ACCTATGTAA ACACCTGCAT GAAGAAGGTG CTGAACTTGT CGTCACCGAC
ATTCACCAAG CTTCACTCGA CAAAGTAGCT ACCGACTTTG GTGCCATCGT TGTTGCCCCA
CAGGATATCT ATGCCCAAGA CGTTGATGTC TATGCGCCAT GTGCATTAGG TGCCACCCTA
AACGATGTCA CCCTGCCACA GCTTAAAGCT AAGATTGTTG CGGGTTGCGC TAACAACCAA
TTAGCCGAAG TTCGCCATGG CGAGCAGTTA AAAGAAATGG GCATTCTGTA TGCACCAGAC
TATGTGATTA ACGCTGGCGG TATTATCAAC GTCTCATTTG AAAAAGACTA TGACGCGGCG
AAATCAGAAG CTAAGGTCAG AGAAATCTAC AACACCCTGC TGAAGATTTT CACTAAGGCC
GATGCTGAAA ACCGTACTAC TGCTGCGGTT GCTGACGAAA TGGCCCGTGC CATTTATCAA
GCGGCAAAAG CCTAA
 
Protein sequence
MAVFNHVSFD EHEQVVFCHD KESGLKAIVA IHNTNLGPAV GGCRMWNYQS DDEALTDVLR 
LSRGMTYKNA LAGLTMGGGK SVIIADPKRP DREALFRAFG RFINSLGGRY YSAEDVGTTT
ADIMIAHQET PYMAGLEGKS GDPSPFTALG TYLGIKAAVK HKLGLDSLKG LKIAVQGVGH
VGYYLCKHLH EEGAELVVTD IHQASLDKVA TDFGAIVVAP QDIYAQDVDV YAPCALGATL
NDVTLPQLKA KIVAGCANNQ LAEVRHGEQL KEMGILYAPD YVINAGGIIN VSFEKDYDAA
KSEAKVREIY NTLLKIFTKA DAENRTTAAV ADEMARAIYQ AAKA