| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1632 |
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| Symbol | |
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| ID | 4257085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1918570 |
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| End bp | 1920483 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122292 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_737684 |
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| Protein GI | 114047134 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.386766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0176215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT GGTCTATTGA TGCTGCTCGT GCTGGGTACA ACGTTACCCA CTGGAGCCAA
GGGTTTTATG GGATCAGCGA CCAAGGTGAG GTGACAGTGT CGCCGGATCC TAAGAATCCT
GATCACAAGA TTGGCTTAAA TGAGCTAGCA AAAGACATGG TTAAAGCGGG GGTCGCTTTA
CCTGTATTAG TTCGTTTCCC GCAAATTCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAAAA ATATGAGTAT CAGGCGGACT ATTTGCTGGT TTACCCCATT
AAAGTAAACC AACAAAAAAC TGTGGTAGAA GAGATCCTTG CGAGCCAAGC ATCAAAAGAA
GTTCCACAAT TAGGCCTAGA AGCCGGCAGT AAGCCAGAGT TAATGGCTGT ATTAGCCATG
GCGCAAAAAG CCAGTTCAGT GATCGTATGT AACGGTTACA AAGATAACGA GTACATTCGT
TTAGCCTTAA TTGGTGAAAA GTTAGGCCAT AAGGTCTACA TCGTTTTAGA AAAACTGTCT
GAGCTGAAGA TGGTGTTGGC CGAGTCTAAG CGCTTAGGGG TGAAACCTCG CTTAGGTCTA
CGTGCGCGCC TTGCATTCCA AGGTAAAGGC AAGTGGCAAG CCAGCGGCGG CGAAAAGTCT
AAGTTCGGTT TATCTGCGGC GCAGATTTTA ACTGTGGTAG ATCAGTTAAA AGAAAACGAT
ATGTTGGATT CGCTGCAGTT ATTGCACTTC CACTTAGGTT CGCAAATCGC GAACATCCGC
GATATTCGTC AGGGTGTGAG TGAAGCGGCG CGTTTCTACT GTGAATTGCG CGAGTTAGGC
GCCAGCATCA ACTGCTTCGA CGTCGGCGGT GGTTTAGCGG TGGATTACGA CGGCACACGT
AGCCAAAGTA ACAACTCGAT GAACTATGGC TTAAGTGAAT ACGCCAATAA CATCGTTAAC
GTGCTTACCG ATATCTGTAA TGAATACGAG CAACCTATGC CACGTATTAT TTCAGAGTCT
GGCCGCCACT TAACGGCGCA CCATGCTGTG CTGATCACCG ACGTGATTGG TACTGAAGCC
TATCAGGTAG AAGATATCCA GCCGCCAGCG GAAGAATCGC CACAACTGCT GCACAACATG
TGGCAATCGT GGACTGAGTT AAGCGGCCGC GCCGATCAAC GTGCACTGAT TGAGATTTAC
CACGATAGCC AAAGCGACTT GCAAGAAGCG CAATCACTGT TTGCCTTGGG CCAATTAAGC
TTGGCGGAGC GTGCGTGGGC TGAACAGGCA AACCTGCGTG TATGTCACGA AGTGCAAGGT
TTGTTAAGCA CCAAAAACCG TTACCACAGA CCGATCATCG ATGAGTTAAA CGAAAAGTTA
GCCGATAAGT TCTTCGTTAA CTTCTCACTA TTCCAATCGT TACCGGATGC TTGGGGTATC
GATCAGGTGT TCCCTGTACT GCCGCTATCA GGTTTAGACA AAGCGCCAGA GCGCCGCGCA
GTGATGTTGG ACATTACCTG CGACTCTGAC GGTATTGTTG ACCAATACGT AGACGGTCAA
GGGATTGAAA CCACTCTGCC AGTTCCGGCT TGGAGCGCAG AGAGCCCTTA CTTGATGGGC
TTCTTTATGG TGGGCGCATA TCAGGAAATT TTAGGTGATA TGCACAACCT GTTTGGTGAT
ACTAACTCTG CGGTGGTCAG CATCGAAGAA AACGGTATGA CCAATATTGA GTCGGTACTT
GCCGGTGACA CAGTCGCTGA CGTACTTCGC TATGTTAACT TAGATGCCGT TGACTTTATG
CGCACCTACG AAGAGTTAGT GAATCAGCAT ATTGTTGAAG AAGAACGCGC GCAAATTTTA
GAAGAATTAC AAGTGGGCCT AAAAGGTTAC ACTTATTTAG AAGATTTTTC TTAA
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| Protein sequence | MNDWSIDAAR AGYNVTHWSQ GFYGISDQGE VTVSPDPKNP DHKIGLNELA KDMVKAGVAL
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQKTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVKPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL TVVDQLKEND
MLDSLQLLHF HLGSQIANIR DIRQGVSEAA RFYCELRELG ASINCFDVGG GLAVDYDGTR
SQSNNSMNYG LSEYANNIVN VLTDICNEYE QPMPRIISES GRHLTAHHAV LITDVIGTEA
YQVEDIQPPA EESPQLLHNM WQSWTELSGR ADQRALIEIY HDSQSDLQEA QSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSTKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSAESPYLMG
FFMVGAYQEI LGDMHNLFGD TNSAVVSIEE NGMTNIESVL AGDTVADVLR YVNLDAVDFM
RTYEELVNQH IVEEERAQIL EELQVGLKGY TYLEDFS
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