Gene Shewmr7_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1629 
Symbol 
ID4257082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1915793 
End bp1916461 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content50% 
IMG OID638122289 
Producthypothetical protein 
Protein accessionYP_737681 
Protein GI114047131 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.039164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA CGTTACACGA AGCCAGAGTT ATCGGTTGCC TACTTGAAAA AGAAGTCACC 
ACCCCAGAGC AATACCCTCT TTCACTCAAT GCCTTGACCC TCGCCTGTAA TCAAAAAACC
AGCCGCGATC CCGTACTGGA CTTAAGCGAA GCGAAGGTTC AAGACGCCCT GGATTCATTG
AATAAAAAGC GACTAATCAG CGAGCAATCC GGCTTTGGTA GCCGAGTCGT CAAATACAAG
CACAGATTCT GCAACACCGA ATTTAGCGAG TTACAACTTT CCAATGCGGC GGTAGCCATT
GTCTGTTTGC TGTTGCTTCG TGGCCCACAA ACGCCGGGCG AATTGCGTAC CCGCAGCAAC
AGGTTGCATG ACTTTAAAGA TGTGCTTGAG GTTGAAGCCT GCATTAAGCA GCTGATGGAG
CGAGATAAAC CCGTGCTAGC GCAGTTACCA CGGGAGCCGG GTAAGCGTGA ATGCCGTTAT
ACTGAGCTGT TTTCCCAAGG CGCAGAGCAG ATTAACGCCG CGTCATTATC CGCCGATTCG
CCGAGCGCGG ACTCAAACTC ACTTAACGCT CAAGATAGAC AACAACTGGA AGCCAGAGTC
ACGCAGCTTG AAGAGCAAGT GGCTAAACTT AAAGATAAGT TAGACTCGCT TATCGCTTCT
TTATCCTAA
 
Protein sequence
MELTLHEARV IGCLLEKEVT TPEQYPLSLN ALTLACNQKT SRDPVLDLSE AKVQDALDSL 
NKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSNAAVAI VCLLLLRGPQ TPGELRTRSN
RLHDFKDVLE VEACIKQLME RDKPVLAQLP REPGKRECRY TELFSQGAEQ INAASLSADS
PSADSNSLNA QDRQQLEARV TQLEEQVAKL KDKLDSLIAS LS