Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1629 |
Symbol | |
ID | 4257082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1915793 |
End bp | 1916461 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122289 |
Product | hypothetical protein |
Protein accession | YP_737681 |
Protein GI | 114047131 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.039164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA CGTTACACGA AGCCAGAGTT ATCGGTTGCC TACTTGAAAA AGAAGTCACC ACCCCAGAGC AATACCCTCT TTCACTCAAT GCCTTGACCC TCGCCTGTAA TCAAAAAACC AGCCGCGATC CCGTACTGGA CTTAAGCGAA GCGAAGGTTC AAGACGCCCT GGATTCATTG AATAAAAAGC GACTAATCAG CGAGCAATCC GGCTTTGGTA GCCGAGTCGT CAAATACAAG CACAGATTCT GCAACACCGA ATTTAGCGAG TTACAACTTT CCAATGCGGC GGTAGCCATT GTCTGTTTGC TGTTGCTTCG TGGCCCACAA ACGCCGGGCG AATTGCGTAC CCGCAGCAAC AGGTTGCATG ACTTTAAAGA TGTGCTTGAG GTTGAAGCCT GCATTAAGCA GCTGATGGAG CGAGATAAAC CCGTGCTAGC GCAGTTACCA CGGGAGCCGG GTAAGCGTGA ATGCCGTTAT ACTGAGCTGT TTTCCCAAGG CGCAGAGCAG ATTAACGCCG CGTCATTATC CGCCGATTCG CCGAGCGCGG ACTCAAACTC ACTTAACGCT CAAGATAGAC AACAACTGGA AGCCAGAGTC ACGCAGCTTG AAGAGCAAGT GGCTAAACTT AAAGATAAGT TAGACTCGCT TATCGCTTCT TTATCCTAA
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Protein sequence | MELTLHEARV IGCLLEKEVT TPEQYPLSLN ALTLACNQKT SRDPVLDLSE AKVQDALDSL NKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSNAAVAI VCLLLLRGPQ TPGELRTRSN RLHDFKDVLE VEACIKQLME RDKPVLAQLP REPGKRECRY TELFSQGAEQ INAASLSADS PSADSNSLNA QDRQQLEARV TQLEEQVAKL KDKLDSLIAS LS
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