Gene Shewmr7_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1616 
Symbol 
ID4258714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1901396 
End bp1901944 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID638122275 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_737671 
Protein GI114047121 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.89267e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.308457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTA ACTTACCTAT AGCATTAACC CTTTTTAGGC TTTTTTTACT GCCCATCTTC 
GTGGTGCTCT TTTATCTGCC TTACAGTTGG ACTCCCTTCG TTGCTGCTTT TGTGTTTTGG
CTTGCCGCCA TTACCGATGC TTTGGATGGC TATGCCGCCC GTAAACTCAA GCAACTCACG
CGTTTTGGAG CTTTTCTCGA TCCCGTTGCC GATAAACTGA TGGTGATCAC CGCGCTGGTG
TTGCTGGTGG AGCAATATGC CGATATCTGG TTAACGCTGC CGGCACTGTT TATGATTGGT
CGCGAAATTG TGATTTCAGC CTTGCGTGAG TGGATGGCCG AATTAGGTAA GCGCGGGACG
GTTGCGGTTT CTTGGATCGG CAAATATAAA ACGGCGGCGC AGATGGTGGC GATTATTGGC
CTGATCTGGC AATACAATCC ATTAATGATT ACCGCGGCAT TTGTGCTGTT ATATATCGCT
GCCGTGTTAA CCTTCTGGTC AATGATGAGC TACATTTTAG CCGCCTGGAA AGATTTAACG
GCCGAATAG
 
Protein sequence
MPFNLPIALT LFRLFLLPIF VVLFYLPYSW TPFVAAFVFW LAAITDALDG YAARKLKQLT 
RFGAFLDPVA DKLMVITALV LLVEQYADIW LTLPALFMIG REIVISALRE WMAELGKRGT
VAVSWIGKYK TAAQMVAIIG LIWQYNPLMI TAAFVLLYIA AVLTFWSMMS YILAAWKDLT
AE