Gene Shewmr7_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1612 
Symbol 
ID4258710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1894786 
End bp1895301 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID638122269 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_737667 
Protein GI114047117 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000410954 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.184685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG CAAACAGTTT CAATAAAGAA GAACTCATCG CCTGTGGCCA TGGGAATTTA 
TTTGGTCCAA ACTCGCCTCG TCTACCCGTG GATAATATGC TGATGATCGA CCGTATCATT
ACTATTAACG ATAACGGCGG CGAATTTGGC AAAGGTGAAA TTGTTGCTGA ACTCGATATT
AATCCAGATC TATGGTTCTT TGGCTGCCAC TTCATCAGCG ACCCAGTAAT GCCAGGTTGT
TTAGGCTTAG ACGCTATGTG GCAGTTAGTA GGTTTTTACC TCGGTTGGGA AGGCGCCGAG
GGTAAAGGCC GCGCACTGGG CGTAGGTGAA GTGAAATTTA CCGGACAAGT GTTACCTGGC
GCGAAAAAAG TGACTTACAA GCTAAACATC AAGCGTACTA TTCATCGTAA ATTAGTCATG
GGTATTGCCG ACGCCATCCT TGAAGTCGAT GGTCGTCAAA TCTATAGTGC GACCGATTTA
AAAGTCGGCG TATTTAGTGA TACCTCGACT TTCTAA
 
Protein sequence
MNKANSFNKE ELIACGHGNL FGPNSPRLPV DNMLMIDRII TINDNGGEFG KGEIVAELDI 
NPDLWFFGCH FISDPVMPGC LGLDAMWQLV GFYLGWEGAE GKGRALGVGE VKFTGQVLPG
AKKVTYKLNI KRTIHRKLVM GIADAILEVD GRQIYSATDL KVGVFSDTST F