Gene Shewmr7_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1607 
SymbolrlmL 
ID4258705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1888162 
End bp1890303 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content49% 
IMG OID638122264 
Product23S rRNA m(2)G2445 methyltransferase 
Protein accessionYP_737662 
Protein GI114047112 
COG category[R] General function prediction only
[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00710463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.246745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATT TTTTTGCTGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAACTG 
ACAGAATTTG GTGCGACTGA GATTAAAGAG AGTGTTGCCG GTGTCTATTT TACCGCGCCG
CTTGCCTTAG CTTACCGTAT TACCCTGTGG ACACGTTTGG CCAGCCGTAT CGTGCTGGTG
ATCTATAAGG GCCCCTGTGA GTCGGCGGAG CAATTATATA ACGCAGCTTA TTGTATTGAT
TGGTCAGCCC ATTTCTCCAA TCGCAACACC TTTAGTATCG ATTTTCACGG CACTGGTGGC
TTTATCAACA ACACCCAGTT TGGTGCGTTA AAGATTAAAG ATGCGATTGT TGACCGTTTC
CGTGATGACG GTGATGCCCG TCCAAACGTC GCCCGTATCG ATGCCGACAT TAAAATCGAC
GCCCATTTCC GTAATGGGGT GATTACCATT GCGATGAACT TCTCGGGACC TTCTTTGCAT
CAACGCGGTT ATCGCTCTAC GACTGGTGAA GCGCCGTTAA AAGAAAACCT CGCCGCCAAC
ATGCTTGTGC GCAGTGGCTG GAAAGCCGCG CCAACCACCT TACTCGATCC TTTCTGCGGT
AGCGGTACTG TGCTGATTGA GGCCGCATTA ATGGCTGCCG ATATTGCCCC AGGATTGCAG
CGCAGCCGTT TTGGTTTTGA ACATTGGCGC CGCCACGATA AAGCCACCTG GCATGAGATT
TTAGAAGAGG CCAAGGCGCG CGCCTCTTTA GGTGTTAAAC GTTGCGATGT GAAGTTCTAC
GGCTCGGATA TCGATTCGCG CTTAGTGGCA CTGGCAAAAC GCAATGCGCA AAACGCTGGT
GTACTTGAGC TGATTGACTT TAAAGTGGCA AATGCACTCA ATGTTGAGCC GCCCGCTGGC
GAAGGTTATT TGATTACTAA CCCTCCCTAC GGCGAGCGTT TAGGCAGTGT CTCTGAGCTA
TTGCAGCTGT ATTACCAATT AGGCGACAAG TTTAAGAAGG AGTTTGGCGG CTGGAAAGTG
GCCATGCTCT GTAGCGATAT TGAGCTGATT TCGGCGCTGA AACTCAAAGC CGATAAGCAG
ATGAAGATGT TTAACGGTGC GCTAGAGTGT GCCTTTAACC TTTATACCTT ACACGCGCAA
AGTACTCGCC GTGATACGCC TGTATTGCCA GAAGGCGTGG ATATTGCCGA TATCGCACCA
GCGTTTGCGA ACCGTATTAA GAAAAACGCT AAGCAATTAG AAAAGTGGGC GAAAAAGGAA
GGTATCGACA GTTACCGTTT ATATGATGCC GACATTCCCG AATATAACGT CGCGGTCGAC
CGCTATTTAG ACCATATCGT GGTGCAGGAA TATATGGCGC CGGCCAGTAT TCCTGAGGCC
GTGACAAAAC GCCGTTTAAG CGATGTGCTG CTGGCGCTGC CTGCTGCGAT TGGTGTCGAT
CCGCATAAGA TCACCATGAA GACCCGTGAG CGTCAAAAGG GCACTAATCA ATATCAAAAG
CTGGATGAGC GAAAGCTTGA ACTTATCACC ACCGAATATG GCGCTAAGTT TAAGTTGAAC
CTGACGGGCT ATTTGGATAC AGGCTTGTTC CTTGACCACA GATTAACCCG CCGTTTAGTG
GGACAAAAAT CGAAAGGACG CCGAGTATTG AACCTATTCT CTTACACAGG TTCCGCCTCT
GTGCATGCTG CATTAGGTGG TGCTAAGTCG GTCACGACGG TTGATATGTC AAACACCTAT
CTGGCGTGGG CGAAGGAAAA CTTTGCGTTA AACGATCTCA GTGGCAAGCA GTATGAGTTT
GTTCAGGCCG ATTGTCTGCA ATGGATCCGC GATAGTGCGC TCGATAAATC CGCGCAATAT
GATTTGATTT TTATCGATCC GCCGACCTTC TCTAACTCCA AGCGGATGGA AGATTCCTTC
GATGTGCAAC GTGACCATGT GAATTTACTC GGCATGCTCA TCAAGCTGTT AAGTCCAAAT
GGGGAGATAG TGTTCTCCAA CAACAAACGC AAGTTTAAGA TGGACACTGA AACCTTGGCC
AAGATGAAAA TCAAGGTGGA AAACATCGAT GATCTGACCT TGCCTATGGA TTACAAGCGC
AATCCCCATA TCCATAACAC TTGGCTTATC ACCCATGCAT AA
 
Protein sequence
MLNFFAAAPK GFEYSLAQEL TEFGATEIKE SVAGVYFTAP LALAYRITLW TRLASRIVLV 
IYKGPCESAE QLYNAAYCID WSAHFSNRNT FSIDFHGTGG FINNTQFGAL KIKDAIVDRF
RDDGDARPNV ARIDADIKID AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN
MLVRSGWKAA PTTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKATWHEI
LEEAKARASL GVKRCDVKFY GSDIDSRLVA LAKRNAQNAG VLELIDFKVA NALNVEPPAG
EGYLITNPPY GERLGSVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELI SALKLKADKQ
MKMFNGALEC AFNLYTLHAQ STRRDTPVLP EGVDIADIAP AFANRIKKNA KQLEKWAKKE
GIDSYRLYDA DIPEYNVAVD RYLDHIVVQE YMAPASIPEA VTKRRLSDVL LALPAAIGVD
PHKITMKTRE RQKGTNQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV
GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY LAWAKENFAL NDLSGKQYEF
VQADCLQWIR DSALDKSAQY DLIFIDPPTF SNSKRMEDSF DVQRDHVNLL GMLIKLLSPN
GEIVFSNNKR KFKMDTETLA KMKIKVENID DLTLPMDYKR NPHIHNTWLI THA