Gene Shewmr7_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1604 
Symbol 
ID4258702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1885136 
End bp1885894 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID638122257 
Producthypothetical protein 
Protein accessionYP_737659 
Protein GI114047109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000904205 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.365296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA GTCTCATTGA AATAACCGTT GCCGAGATTA AAGAGCTCGC CGATGTCGAG 
CCAAAACAGG CCAGTAAACG TTTCGAACTC ATCGCCACCA CGATGAACGA TGAGCAATTA
GTCGAAGTCA TTGAAAAAAT GGATATTGTG ACCCTGACGC AAATCAACAG TCACCACGAT
ATCTCCTGCC CGTCAATTAT GTCGGAGCTG ATGACCCCTG AGCAAATTCG CGACATCGTC
TGTCAGCAAC CTTTGTATTG GGAAGAAAAA ATCAAGAACA ATGCCGAAGA ACTCATTCAG
CATACCTTTG ATTTTTTGAC CTATTTAATT CGCATCCAAG ATAGCGACGA AAAACAAACC
GCTATTTTAG AGTGTATTGC CGAAGATCCC GCCGGCCTCT TCTATCTGTC TATCCCCTTT
ATCGAAATGA TGTTGGGTGA GCGCCACGAC GATGAAGACC ACTTCAACGA TTATTATGAC
GATGAAGAAG ATACCGACAC CGTTGGCTAT GACAGCCGTG TCGACAGTGA AGAAGCCCAT
AGCTTAAGCC TAGATGACCC ACGTAGTCTG ATGGCGTTAA TCCATGAGCT GGCACCCGAT
GTAGAAAAAG CCATTAAAAA CCTGCTGCGT AACGAAAGCT CTGGCTGGGA GATGATCATT
AATAAGTTCG TCAATGAACT GGTTATCCAA GCCAAAGAGA AAAACCAAGT CACGGATGAA
TACGCAGAAG TGGATGATAT GTTTAGCTTT TTAGATTAA
 
Protein sequence
MNTSLIEITV AEIKELADVE PKQASKRFEL IATTMNDEQL VEVIEKMDIV TLTQINSHHD 
ISCPSIMSEL MTPEQIRDIV CQQPLYWEEK IKNNAEELIQ HTFDFLTYLI RIQDSDEKQT
AILECIAEDP AGLFYLSIPF IEMMLGERHD DEDHFNDYYD DEEDTDTVGY DSRVDSEEAH
SLSLDDPRSL MALIHELAPD VEKAIKNLLR NESSGWEMII NKFVNELVIQ AKEKNQVTDE
YAEVDDMFSF LD