| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1573 |
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| Symbol | |
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| ID | 4254919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1840330 |
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| End bp | 1843758 |
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| Gene Length | 3429 bp |
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| Protein Length | 1142 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122221 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_737628 |
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| Protein GI | 114047078 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00374514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000804403 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATTAA AACAAATAAA ACTTGCCGGC TTTAAGTCGT TTGTCGATCC CACCAAAATT
CCGTTTTTAC AGGCATTGAG CGCCATTATT GGCCCAAATG GCTGCGGTAA GTCCAACGTG
ATTGACGCCG TGCGTTGGGT GCTAGGCGAA AGCTCGGCAA AGCATTTGCG CGGCGACTCC
ATGAGTGACG TGATTTTTAA CGGCTCCAGC GCCCGTAAAC CCGTGTCTGT GGCGGGCGTT
GAACTGGTGT TTGAAAATAA AGAGGGCCGC CTTGCGGGCC AATACGCCAG TTATGAAGAA
ATCTCGGTAA AACGTCAGGT GAGCCGTGAC GGTGAGTCTT GGTATTTTCT CAACGGCCAA
AAGTGTCGCC GCAAAGACAT CACCGATCTG TTTATGGGCA CCGGGCTTGG GCCGCGCAGT
TACGCCATTA TCGAACAGGG CACGATTTCA CGTTTAATCG AATCTAAACC CCAAGATTTA
CGGACTTTTA TTGAAGAAGC GGCGGGGATT TCCCGCTATA AAGAGCGGCG GCGTGAAACG
GAAAACCGTA TCCGTCATAC CCGCGAAAAC TTGGAGCGTT TAGGGGATAT TCGCAGCGAG
TTAGCTAAAC AACTCGAAAA ACTCAGTCAG CAGGCCAAGG CGGCGAAGCA ATATCGTGAG
CTGAAACAAG CAGAGCGTAA AACCCATGCC GAGCTGCTGG TGATGCGCTA TCAAGAGCTG
CAGAGCCAAA TGGCGAGTCT ATCGGAGCAG ATTAGCTCGC TCGAGTTGCA ACAAGCGGCG
GCCCAGTCCT TAGCGCAAAC CGGCGAGTTA GAAAGCACCG AGTTGCAACT CACACTTTCG
CAGTTAGCCG AGCAGGAGCA GCAGGCGGTT GAAGCCTATT ACCTGACCGG TACCGAAATC
GCCAAGCTTG AGCAACAGTT ACAGAGCCAA AAACAGCGCG ACGCCCAGTT ACATACTCAG
CTCGAGCAGT TGAGTGAGCA AATCACCCAA AACCAAGCTA AATTAGCCGC TTACCAAGCC
AGCTTTCAAG CGCTTGAGGC GGAGCTTAGC CAACTTGCGC CGCAACATGA ATTGCAGCAA
GAAATGCTCG ATGAGCTGCA AGCGCAATGG GAGATGAGTG TTTCGCGCAC TGAGGCCCAA
AGTGAAAGCG CCAGAGTGCT GGCGGCGACC GTTGCTCAGC ATAAGCTGCA ATTAGAATTA
CACCGCAGCA AACTGGCTCA TCAGCAGCAA TTAAATGCCC ACAAAACCCA GCTACACCAA
GAGCAACAAC AAGAGCTGGC CTCGCTTAAT GCGCATGCCC TCGAAGATAG CAGCGCATCA
CTTAATGATG AGATCGCGCA GTTAGAGCAA GCATTAGCTG AACAAGTTGA AATCAATCAA
GAGTTTGAAT CCACTCTGGC TGCCGATACT CATGCGTTAG ATTTGGCCCG CGGTGAGTTT
GAGCAATTGT CACAGCGTTT AACCTCGATG CGGGCACGCT TCGAACTGGT TGAACAATGG
CTCGCGAAAC AAGAAGAGTT AAGTGATAAA CCGCAGCTAT GGCAAAGTAT TCAAGTCGAA
AACGGATGGG AAGCCGCCGC CGAACTGGCG CTGCAGGGAT TGATGACGCT GCCTGTGGGC
GTTAACGCCA ATGAAATAGG GTTTTATGCC GATGCGACCT TGGCGGCGGA TGCGCATCTC
GATGGCTCTC CCATCTTAGG TGCTAAATTG AACCTTGCTC CTTGGCTTAA GGGACTCAAA
TGGGCCGATA ATCTGGCCAG CGCACAAGCA CTGCTGCCGA GCTTGGCGGC CGATGAGCGA
ATCGTGACCG CCGACGGTTA CTTGCTCGGC AAAGGTTTTT TGATTGCTAA ACAAGACAAT
AGCCAATCGT TAGTGCAATT GAGTAAAGAG CAAATCCAGT TAAGCGAGGC CATCGCTGAT
TGCGAACAGG CAAAAGCCAT ACAGCAGGCA AGGCTCGATG AATTAGCGCA GCAATTAACC
CAAGTGCGTG ACAGCTTAAG CCAAGGCACT AAACGCTTAC ACCAGTTGCA GCTCGATAAA
GCCACCAAAT CGACCCAGCT TAATAACGCA GAGATCCAGG CCAAGCAGCG CGAAGCTAAG
CGGGGGCAAC TCGCTGAAAC CGTTGCCCGA ACCCACGCCG AGTTAGCCGA ACTTGCCGAG
CAGTTAATAT TGCTTGCGGA GCAAGAGGAT GAGCTGGCAG AGGCGCTGGA GATAAGCCTT
GAGCAGCAAC AGCAACAAAG CCAAGATGCG CAGGGGGATA TGGCCCGCCA TCAAGCCCTG
AAGGCACAAA TTGGCGATGC CGAGCGGCGT TTGACGAGCC TCAATGCCAG TCTGCAATCG
ATCGCTACTC GGATGGCGGT GAGCACAGAA CAAATTGAAT TACAGCGTGT ACGTGTCAGT
GAATTAGTCC ACTCAAAGGA AATACTGTCA GCCCAACTTG CCAACGTAGC GGCACAAGAG
GGCGATCAGC AAACGGCGCA GCTCAGCGAA CAGTTAGCGC AGCTACTCAA TCGGCAGCAG
AGTCAGCAAC AGGCACTCCA AAGTCTCAGG TCACAACAAA GTTCGCTCAC TGAAACGCTA
AACAGTATAG GATTAAAGCA AAAACAAGAG CTTGGTAAGC TTGAGGGCTT GACTCAAAGC
CTAAGCACGT TAAAGTTACG TCGTGAGGGA TTAAAAGGGC AGGCCGATAG CCAATTAGTG
GCGCTGTCAG AGCAACAAAT TGTGCTCGCC CAGATTGTCG ATTCCCTGCC TGCGGATGGG
CATCCCGATA AGTGGCAGCG TGATTTGGAT CTGATCCGCC AAAAAATTAT TCGCTTAGGA
GCGATAAACC TCGCGGCGAT CGAAGAATAT GAACAACAAA GTGAGCGAAA ATCCTATTTG
GATCATCAAG ATGAAGATCT AAATAACGGT CTGGCAACCC TAGAGGAAGC CATTCGGAAA
ATCGATAAGG AGACCCGCAC TCGCTTTAAG ACCACATTTG ATGCGGTAAA CGAAGATCTT
GGGCGTTTAT TCCCTAAGGT ATTCGGTGGC GGACGCGCGT ATTTAGCGCT GACGGAAGAC
GATTTATTAG AAACGGGCGT GACCATCATG GCCCAACCGC CAGGTAAGAA GAACAGTACA
ATCCATCTTC TTTCCGGTGG TGAAAAAGCC CTAACGGCTT TATCATTGGT ATTCGCGATT
TTCAGGTTGA ATCCAGCTCC CTTCTGTATG TTAGACGAAG TGGATGCGCC CTTAGACGAT
GCCAACGTAG AACGATTCTG TCGATTATTG AAGGAAATGT CGCAGAGCGT ACAGTTTATC
TATATCAGCC ATAACAAAAT TACGATGGAG ATGGCTGATC AACTTATCGG TGTGACTATG
CATGAGCCGG GTGTCTCTCG TATAGTCGCA GTAGATTTAG AGCAAGCGGT GGCGATGGCC
GACGCTTGA
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| Protein sequence | MRLKQIKLAG FKSFVDPTKI PFLQALSAII GPNGCGKSNV IDAVRWVLGE SSAKHLRGDS
MSDVIFNGSS ARKPVSVAGV ELVFENKEGR LAGQYASYEE ISVKRQVSRD GESWYFLNGQ
KCRRKDITDL FMGTGLGPRS YAIIEQGTIS RLIESKPQDL RTFIEEAAGI SRYKERRRET
ENRIRHTREN LERLGDIRSE LAKQLEKLSQ QAKAAKQYRE LKQAERKTHA ELLVMRYQEL
QSQMASLSEQ ISSLELQQAA AQSLAQTGEL ESTELQLTLS QLAEQEQQAV EAYYLTGTEI
AKLEQQLQSQ KQRDAQLHTQ LEQLSEQITQ NQAKLAAYQA SFQALEAELS QLAPQHELQQ
EMLDELQAQW EMSVSRTEAQ SESARVLAAT VAQHKLQLEL HRSKLAHQQQ LNAHKTQLHQ
EQQQELASLN AHALEDSSAS LNDEIAQLEQ ALAEQVEINQ EFESTLAADT HALDLARGEF
EQLSQRLTSM RARFELVEQW LAKQEELSDK PQLWQSIQVE NGWEAAAELA LQGLMTLPVG
VNANEIGFYA DATLAADAHL DGSPILGAKL NLAPWLKGLK WADNLASAQA LLPSLAADER
IVTADGYLLG KGFLIAKQDN SQSLVQLSKE QIQLSEAIAD CEQAKAIQQA RLDELAQQLT
QVRDSLSQGT KRLHQLQLDK ATKSTQLNNA EIQAKQREAK RGQLAETVAR THAELAELAE
QLILLAEQED ELAEALEISL EQQQQQSQDA QGDMARHQAL KAQIGDAERR LTSLNASLQS
IATRMAVSTE QIELQRVRVS ELVHSKEILS AQLANVAAQE GDQQTAQLSE QLAQLLNRQQ
SQQQALQSLR SQQSSLTETL NSIGLKQKQE LGKLEGLTQS LSTLKLRREG LKGQADSQLV
ALSEQQIVLA QIVDSLPADG HPDKWQRDLD LIRQKIIRLG AINLAAIEEY EQQSERKSYL
DHQDEDLNNG LATLEEAIRK IDKETRTRFK TTFDAVNEDL GRLFPKVFGG GRAYLALTED
DLLETGVTIM AQPPGKKNST IHLLSGGEKA LTALSLVFAI FRLNPAPFCM LDEVDAPLDD
ANVERFCRLL KEMSQSVQFI YISHNKITME MADQLIGVTM HEPGVSRIVA VDLEQAVAMA
DA
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