Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1544 |
Symbol | |
ID | 4257785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1802910 |
End bp | 1803659 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122192 |
Product | ABC transporter related |
Protein accession | YP_737599 |
Protein GI | 114047049 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0894147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACG TCGTTTCAAA AAAAAGTGCC ATCAATGTTG TTAACCTCGA AAAATCGGTG ACTACTCAGG AAGGTTCGCT CACTATCCTC AAGGGCATTA ACTTAGATGT CAAGCAGGGG GAAAGTGTGG CGATATTAGG CCCCTCAGGT TCGGGCAAAT CGACACTGCT TGGCTTACTC GCCGCGCTTG ATACCCCCAC ATCGGGGGAG ATTTGGCTCG ATGGCCAAGC CCTGTCACCG CTCAATGAAG AACAGAAAGC CGCGCTGCGT AAGCAGAAAG TGAGCTTTAT TTTTCAATCT TTTATGTTAG TTGATACCTT AACTGCTCTC GAAAATGTGA TGCTACCTGC CGAGCTTGCT GGGGTTAAAA ATGCCAAGGA GAAGGCCGAG GCCATGCTGG GGCGTGTGGG GTTATCCCAC CGTTTGACCC ATTTACCTAA ACAGCTATCC GGCGGCGAGC AGCAAAGGGT AGCCATTGCT CGCGCCTTTA TTTGTGAACC TAAGGTGCTA TTTGCCGACG AGCCAACCGG CAATTTGGAC AGTGTTAACG GCCATAAAAT TGCCGATATG TTGTTTGAAC TGAACCAAGA GAGCCACACC ACGCTCATCC TGGTCACCCA CGACTTGCAA TTGGCGAAGC GCTGCCAACG GCAACTGGTT ATGGATAACG GTCACTTACA GGAAGAGTTA GATTCGGCCT CATCGCACAG CGTGAATGAC AACCCTGAAT TAAGTGCCAA GGAGGCCTAA
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Protein sequence | MSNVVSKKSA INVVNLEKSV TTQEGSLTIL KGINLDVKQG ESVAILGPSG SGKSTLLGLL AALDTPTSGE IWLDGQALSP LNEEQKAALR KQKVSFIFQS FMLVDTLTAL ENVMLPAELA GVKNAKEKAE AMLGRVGLSH RLTHLPKQLS GGEQQRVAIA RAFICEPKVL FADEPTGNLD SVNGHKIADM LFELNQESHT TLILVTHDLQ LAKRCQRQLV MDNGHLQEEL DSASSHSVND NPELSAKEA
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