Gene Shewmr7_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1513 
Symbol 
ID4258263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1764673 
End bp1765485 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID638122161 
Productexonuclease III 
Protein accessionYP_737568 
Protein GI114047018 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00343054 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG TTTCTTTCAA TATCAATGGA TTGCGTTCTC GCCTGCATCA ATTGCAAGCG 
TTAATCGACA GCCATCAGCC CGATATTATC GGCCTGCAAG AAACCAAAGT GCACGATGAA
GCCTTCCCGC TCGCCGAAGT CGAGGCCATG GGCTATCACG TGCATTACCA CGGTGGCAAG
GCACACTATG GCGTAGCCAT GCTCTCCAAA GCCGCCCCAA TTAAGGTGCA AAAGGGTTTT
GCAACCGATG AAGAAGATGC GCAGCGCCGC ATGATTATCG GCACCTTTGC TCAGGCAAAT
GGCCGTCCGT TAACTGTGTT GAATGGTTAT TTTCCTCAGG GCGAAAGCAT CGACCATCCG
ACAAAGTACC CTGCTAAACG TAAGTTTTAT CAGGACTTAA TGGCGCATTT GCACGCTAAT
CATAGCAACG ATGAAGATAT CGCCATCATT GGGGATATTA ATATTTCGCC CATCGATTTG
GATATCGGCA TTGGTGAAGT CAACCGCAAA CGTTGGCTAA AAACTGGAAA ATGCAGTTTC
CAACCCGAAG AGCGTGAATG GCTCAAGACC CTGCAGGATT GGGGATTGGT GGATACCTTC
CGTCAACTAC ACCCCGACCG CAGCGAGCGT TATTCATGGT TCGATTACCG CAGCAAAGGC
TTCGATGATA ACCGCGGCCT ACGCATCGAT GTGATCTTAG CCACGCCGTC ACTGGCCGCA
CGTTTAATCG AATCAGACGT CGATTACGAT CTGCGCGGCA TCGATAAACC CTCAGATCAC
GCGCCAATTT GGAGCACCTT TAAAGAAGCC TAA
 
Protein sequence
MKIVSFNING LRSRLHQLQA LIDSHQPDII GLQETKVHDE AFPLAEVEAM GYHVHYHGGK 
AHYGVAMLSK AAPIKVQKGF ATDEEDAQRR MIIGTFAQAN GRPLTVLNGY FPQGESIDHP
TKYPAKRKFY QDLMAHLHAN HSNDEDIAII GDINISPIDL DIGIGEVNRK RWLKTGKCSF
QPEEREWLKT LQDWGLVDTF RQLHPDRSER YSWFDYRSKG FDDNRGLRID VILATPSLAA
RLIESDVDYD LRGIDKPSDH APIWSTFKEA