Gene Shewmr7_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1473 
SymbolfadJ 
ID4255635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1711177 
End bp1713306 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content48% 
IMG OID638122122 
Productmultifunctional fatty acid oxidation complex subunit alpha 
Protein accessionYP_737529 
Protein GI114046979 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID[TIGR02440] fatty oxidation complex, alpha subunit FadJ
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.451706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0332103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CATTTAATTT AACCCGCCGT GAAGACGGTA TCGCCATTCT AACGATGGAC 
GTACCCGGCG AAACCATGAA TACCCTCAAG GCAGAATTTG GCCCTGAGAT CAGTGAGATT
CTGTCTGAGA TTAAACGCGA TAGCAGTATC CGTGGCCTAG TGCTGATTTC GGGTAAAAAA
GACTCCTTCG TAGCTGGGGC GGATATCTCT ATGCTCGACG CTTGCCAAAC GGCGGGCGAT
GCTAAAGCCT TATCCCAACA AGGGCATGTG GTGTTTAACG AGTTAGAAGC CTTGAATATC
CCTGTGGTTG CCGCGATACA TGGCGCTTGT TTAGGGGGCG GTTTAGAGCT TGCGCTTGCA
TGCCATCAAC GTGTGTGTAG TGATGATGGC AAGACCATGC TGGGTGTACC CGAAGTGCAA
CTCGGTTTAT TACCCGGTGG CGGCGGTACT CAGCGTTTGC CTCGTTTAGT GGGGATCACC
ACTGCCTTGG ATATGATGTT GACTGGTAAA CAAATCCGTC CGAAACAAGC GTTAAAGATG
GGCTTAGTTA ACGATGTGGT GCCACAGACG ATTTTACTGC AAACCGCGGT GGAAATGGCG
CTCGCGGGTA AGCGCACGGC GAAACCAGTT AAAAAATCGC TGGTCAATCA ATTACTCGAA
GGTACAGGAT TCGGTCGTAA CATTATTTTC GATCAAGCCG CCAAGCAAGT CGCTAAGAAA
ACCCAAGGCA ACTATCCTGC GCCAGCAAAA ATTATTGATT GCGTGCGCCA AGGTATGGCT
AAGGGAATGC AAAAAGGGCT TGAGGTGGAA GCCAGCCATT TTGCAGAGCT GGTGGTGTCG
AAAGAATCAG AGGCGCTGCG CAGTATTTTC TTTGCCACCA CAGAGATGAA GAAAGAAACT
GGCGCCGAAG GGGCGACACC ACGTAAAGTC AAAAAAGCCG TGATCTTAGG TGGCGGTTTG
ATGGGCGGTG GTATTGCTTC GGTCACGACG ACTAAGGCTA AAATTCCTGC AAGGGTAAAA
GACATTAACG AAAAGGGCTT AAGCAATGCG CTTTCTTACG CCTATAAGTT ATTGGATAAA
GGCGTTAAAC GTCGTCATAT GACGCCAGCC GTTCGCGACA ATTTAATGGC ACTGATGACA
ACGACGACTG AATATAAAGG CGTTAAGGAC GCTGATATTG TTGTTGAAGC CGTATTTGAG
GATTTAGCGC TTAAACATCA GATGGTTAAA GATATTGAGC GTGAATGCGG TGAGCACACG
ATTTTTGCAT CTAACACCTC ATCTTTACCC ATTGGCCAAA TTGCACAAGC GGCCAGCCGT
CCTGAAAATG TGATTGGCTT ACATTATTTC TCACCAGTAG AAAAAATGCC GTTGGTGGAA
GTGATTGCCC ATGCGAAAAC GTCTCCTGAG ACGATTGCTA CCACAGTGGC CTTTGCCCGC
AAACAGGGTA AAACGCCAAT CGTGGTACAA GATGGTGCCG GTTTTTATGT TAACCGTATC
CTCGCGCTTT ACATGAACGA AGCTGCGCAA TTACTTCTGG AAGGGCAGAG TATTGAACAC
TTAGACAAAG CCTTAGTGAA ATTCGGTTTC CCCGTTGGCC CTATCACTCT ACTCGATGAA
GTGGGGATCG ATGTCGGTGC TAAAATCGCT CCAATCCTTG AAACAGAACT GGGTGAGCGC
TTTAAAGCCC CTGCAGCCTT CGATAAGTTA CTGAGCGATG ATAGAAAAGG CCGTAAAAAT
GGCAAAGGTT TCTATCAATA TGCTGCTGGC AATAAAGCGT CGAGCAAGAA GAAAGTCGTG
GATGAAAGCG TGTATGGCGT ATTAGGTATC AAACCGGGTA TCGATAAAGA AATGAGCGCG
GTAGCAGAAC GTTGTGTAGT GCAAATGCTC AATGAAGCAG TACGTTGTTT AGATGACGGC
ATTATTGCTT CACCGCGCGA TGGTGATATC GGCGCTATCT TCGGTATTGG TTTCCCACCA
TTCTTGGGTG GCCCATTCCA CTATATCGAT ACTCTAGGGG CCGATAACTT AGTCAAGATA
CTGGAACGTT ACCAGGCTCA ATACGGCGAC CGATTTGAGC CATGTCCACG TCTTAAGGAG
ATGGCGGCAG AAAAGACACG TTTCTTCTAA
 
Protein sequence
MEKTFNLTRR EDGIAILTMD VPGETMNTLK AEFGPEISEI LSEIKRDSSI RGLVLISGKK 
DSFVAGADIS MLDACQTAGD AKALSQQGHV VFNELEALNI PVVAAIHGAC LGGGLELALA
CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK QIRPKQALKM
GLVNDVVPQT ILLQTAVEMA LAGKRTAKPV KKSLVNQLLE GTGFGRNIIF DQAAKQVAKK
TQGNYPAPAK IIDCVRQGMA KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET
GAEGATPRKV KKAVILGGGL MGGGIASVTT TKAKIPARVK DINEKGLSNA LSYAYKLLDK
GVKRRHMTPA VRDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP IGQIAQAASR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSIEH LDKALVKFGF PVGPITLLDE
VGIDVGAKIA PILETELGER FKAPAAFDKL LSDDRKGRKN GKGFYQYAAG NKASSKKKVV
DESVYGVLGI KPGIDKEMSA VAERCVVQML NEAVRCLDDG IIASPRDGDI GAIFGIGFPP
FLGGPFHYID TLGADNLVKI LERYQAQYGD RFEPCPRLKE MAAEKTRFF