| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1462 |
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| Symbol | |
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| ID | 4255624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1697618 |
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| End bp | 1698913 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638122111 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_737518 |
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| Protein GI | 114046968 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00212901 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000339472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAATCAT TCAACAAGAC ACTGCTTGCC GTTGCCGTTG CATTGGCGAG TTCACAAACT
TTCGCATCGG GTTTCCAATT AAACAGCCAA TCAGCCACAG GTATGGGCCG TGCATTTGCC
GGTGACGCAG TCATCGCTGA TAACGCTTCA GTGTTATCTC GTAACCCAGC AGCGATGGCG
CTCTTTGATA AAGACGCAAT CTCTTTCGGC TTAACCTATG CCGATATTAC TGTTGACGTT
AAAGACGTTA ACTTTGCCGG TGGCGCCTAT GACTTAGGCA GTATCGACGA TGCGGGTAGC
TCTAAAGTTA TCCCGAACAT TTTCTACATT CACCCAATCG ACGATAAATT CGCCGTGGGT
TTTGCCGCAT TCTCTAACTT CGGTACCGGT ACCGATGCCA GCTCACTTTC GAAGAATTTG
CCAGCAGGCT CACCAGCGCC TTTCGACCTA CTTGGTGAAA CTGAAGTCAC TACCGTTAAC
TTCAACGCCA GCGTGTCATA CCGCATCAAC GATATGTTCA GTATCGGCGC GGGTCTGGAT
GCCGTCTATG GCGAAGGCCG CTTAACCCGT AATATGGGCA CTACGCCTCT GGTTGACGTA
GACGCTGATG GTTGGGCTTT CGGTGGTATC GTAGGTGCCA CTATTGAGTT AGATAAAGAC
AACCGTTTCG GTATCAGCTA CCGTTTCAGC CCAACCGTCA ATGTTGAAGG CGATATCAAT
ACTGTCTCGA TGACAACCAT TCCTGGTGTA GGTGCAGTAC CAGTTACGAC CAGTTTTGAT
AGCTTAGATG TACCGTTAGC GGATATTTTC CAAGTAGCCG GTTTCCATCA AATCACCCCT
AAATTTGCCC TGCACTACAC TGCCCAGCAC ACTCAGTGGG GTAACTTTGA TCAAATCACC
GCGAAAGACG GCACAGCAAC AATTGCCGCT GTGGGTATGA CTCAGCCTGT AGGTGATGTA
GCCCTGAAAG AATACCAATG GAAAGATTCA TGGTTATTCA GCGTGGGTGG TACTTACACC
ATCAACGAAC AATTCACCGT TCGTGCAGGT TACATGCATG ACCAAGGCGT TGTGGACGAA
ATCAGCTCGA TTTCATTCCC AGACTCTGAC CGTAACTGGT TCACAGCGGG TATGAGCTAC
CACATCAATC CACAAAACAC CGTTGACTTC GGTATCGCTT ACATTAAAGG TGAAGAAGTT
CACCTGATCG AAAACAGCGC AATCACAGGC CCTGTGAACG CGGTAACTGA ATCAAGCGGT
ATGTACTACT CAGTACAGTA CAGCTACCAG TTCTAA
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| Protein sequence | MKSFNKTLLA VAVALASSQT FASGFQLNSQ SATGMGRAFA GDAVIADNAS VLSRNPAAMA
LFDKDAISFG LTYADITVDV KDVNFAGGAY DLGSIDDAGS SKVIPNIFYI HPIDDKFAVG
FAAFSNFGTG TDASSLSKNL PAGSPAPFDL LGETEVTTVN FNASVSYRIN DMFSIGAGLD
AVYGEGRLTR NMGTTPLVDV DADGWAFGGI VGATIELDKD NRFGISYRFS PTVNVEGDIN
TVSMTTIPGV GAVPVTTSFD SLDVPLADIF QVAGFHQITP KFALHYTAQH TQWGNFDQIT
AKDGTATIAA VGMTQPVGDV ALKEYQWKDS WLFSVGGTYT INEQFTVRAG YMHDQGVVDE
ISSISFPDSD RNWFTAGMSY HINPQNTVDF GIAYIKGEEV HLIENSAITG PVNAVTESSG
MYYSVQYSYQ F
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