Gene Shewmr7_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1416 
Symbol 
ID4258427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1638449 
End bp1638841 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content42% 
IMG OID638122050 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_737472 
Protein GI114046922 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00233677 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.422691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TTTTAGAGAT ATTAACTCAC GGTCGTCGTT TTAAAGCTGC GGTAAAAGAT 
CTCAGCGTTG AAGAACTGCG TGATTTAGCG GCTAAGCTAG ATAAAATTTT AGTTGAGCGT
GAGTCAATGG CAGCAGAAGA GCAGCAAGCT ATTGCTGCAC GTAATGCTAA AATCGAAGAA
ATCCGCCAAC AAATGGAAGC AGTTGGTTTA TCAATCGACG ACTTAGGTGG CGTAGCAGTT
AAAGCTGTGG GTAAAAAACG CGCTCCACGT CCAGCAAAAT ATCAAATTGA AGTTAACGGC
GAAGTGATCC AGTGGACTGG TCAAGGTCGT ATGCCAACGG TATTTAAGAA CGAAGTCAAT
AAAGGCCGTT CTATGGATGA TTTCTTAATC TAA
 
Protein sequence
MSEFLEILTH GRRFKAAVKD LSVEELRDLA AKLDKILVER ESMAAEEQQA IAARNAKIEE 
IRQQMEAVGL SIDDLGGVAV KAVGKKRAPR PAKYQIEVNG EVIQWTGQGR MPTVFKNEVN
KGRSMDDFLI