Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1416 |
Symbol | |
ID | 4258427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1638449 |
End bp | 1638841 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638122050 |
Product | histone family protein nucleoid-structuring protein H-NS |
Protein accession | YP_737472 |
Protein GI | 114046922 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00233677 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.422691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT TTTTAGAGAT ATTAACTCAC GGTCGTCGTT TTAAAGCTGC GGTAAAAGAT CTCAGCGTTG AAGAACTGCG TGATTTAGCG GCTAAGCTAG ATAAAATTTT AGTTGAGCGT GAGTCAATGG CAGCAGAAGA GCAGCAAGCT ATTGCTGCAC GTAATGCTAA AATCGAAGAA ATCCGCCAAC AAATGGAAGC AGTTGGTTTA TCAATCGACG ACTTAGGTGG CGTAGCAGTT AAAGCTGTGG GTAAAAAACG CGCTCCACGT CCAGCAAAAT ATCAAATTGA AGTTAACGGC GAAGTGATCC AGTGGACTGG TCAAGGTCGT ATGCCAACGG TATTTAAGAA CGAAGTCAAT AAAGGCCGTT CTATGGATGA TTTCTTAATC TAA
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Protein sequence | MSEFLEILTH GRRFKAAVKD LSVEELRDLA AKLDKILVER ESMAAEEQQA IAARNAKIEE IRQQMEAVGL SIDDLGGVAV KAVGKKRAPR PAKYQIEVNG EVIQWTGQGR MPTVFKNEVN KGRSMDDFLI
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