Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1401 |
Symbol | |
ID | 4258570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1620406 |
End bp | 1620912 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638122035 |
Product | copper resistance lipoprotein NlpE |
Protein accession | YP_737457 |
Protein GI | 114046907 |
COG category | [M] Cell wall/membrane/envelope biogenesis [P] Inorganic ion transport and metabolism |
COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0735011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGG TTATCATCAC ACGACAGCCA ATTAATCAAA CGGTTAAGAT GAATATGAAA CTTTCACAGA TATCACTCGC CCTTCTCGCT TTAATGATTA CCGCATGCAG TGAGCCAGCT AAGACAGTGG CTAATGAGCC TGTCGCTGCG CCACATCAAG ATACGCAAAC AAACCTACCA CTTAGCGATA CCAGCCAAAA TGCGCTTGAT TGGCCCGGAG TATATGAAGG CGTTATCCCC TGTGCAAGTT GCGAAGGGAT CCAAACCACA CTCACGCTCC AAGCGGATAA TAGCTTTGAA TTAAAGAGTA TTTACTTGGG TAAAGATGAG TCCATCTTTA AAGTGGCAGG AAAATTTGAC TGGGATAGCA ATGGCTCAAA AATCACCTTA TCCGATGGCA CTAAATACTT GGTAGGGGAA AACCAACTGT TTATGTTAGA TATGGAAGGT AATCGGGTAA GTGGCGAACT AGCAGAACAT TACATTTTGA AGAAGAAAGA GATTTAG
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Protein sequence | MMAVIITRQP INQTVKMNMK LSQISLALLA LMITACSEPA KTVANEPVAA PHQDTQTNLP LSDTSQNALD WPGVYEGVIP CASCEGIQTT LTLQADNSFE LKSIYLGKDE SIFKVAGKFD WDSNGSKITL SDGTKYLVGE NQLFMLDMEG NRVSGELAEH YILKKKEI
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