Gene Shewmr7_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1400 
Symbol 
ID4258569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1619657 
End bp1620310 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID638122034 
Producthypothetical protein 
Protein accessionYP_737456 
Protein GI114046906 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0282645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCCCA ATATCCAGAT CATCCGTTAT GAAGAATGCG AATCGAGCTT ATGGAAAAAC 
GGTGGTGGCA GTACTAAACA ACTGATGATA TGGCCAAAGG GGGCAGAACT CAGCAACTTT
GATTTTAGGA TCAGCATCGC CACCATTTCG AGCGATGGCC CCTTCTCACT CTTCCACGGT
ATCGATAGAC AGCTATGTAT ATTGGAAGGT GAAGGGGTAA GACTAAATAT CAAGAGGAAT
GATTTAGGAC AATCAGAGGA AATCATCCTT AGTCCGAATG AGCAGCCATT TTGCTTTAGC
GGGGAAACTC AAATAGAGAG CAAACGATTA GCTAATCAGA TCCTAGACTT TAATGTGATG
ACGAGGCGCG GCAACTACAC AGCAAGAATT GAGCGCATCG AGTGCAATGG CAAAGTCCAG
ATTGAAACCA AAGATAACAG TGCTCAGCAA AGCGCGAATA CCCAGCCTAT CCAATTTTTG
CTGCCGCTCG CGCCAATCCG CTGTATTTAT CAAGGAGAGA AGATAACGCT GCAAAGTTAC
GATCTGTTGC AATTAGCAGA GGAGAAAAAC ACTACTGTGG AATGCTTAAC ATTGATAAGC
CGCCAAACAA CGCAGCTGAT ACGCGTGTGT ATTGAAGCAA TCAGCCATCG ATAG
 
Protein sequence
MNPNIQIIRY EECESSLWKN GGGSTKQLMI WPKGAELSNF DFRISIATIS SDGPFSLFHG 
IDRQLCILEG EGVRLNIKRN DLGQSEEIIL SPNEQPFCFS GETQIESKRL ANQILDFNVM
TRRGNYTARI ERIECNGKVQ IETKDNSAQQ SANTQPIQFL LPLAPIRCIY QGEKITLQSY
DLLQLAEEKN TTVECLTLIS RQTTQLIRVC IEAISHR