Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1400 |
Symbol | |
ID | 4258569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1619657 |
End bp | 1620310 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638122034 |
Product | hypothetical protein |
Protein accession | YP_737456 |
Protein GI | 114046906 |
COG category | [S] Function unknown |
COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0282645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATCCCA ATATCCAGAT CATCCGTTAT GAAGAATGCG AATCGAGCTT ATGGAAAAAC GGTGGTGGCA GTACTAAACA ACTGATGATA TGGCCAAAGG GGGCAGAACT CAGCAACTTT GATTTTAGGA TCAGCATCGC CACCATTTCG AGCGATGGCC CCTTCTCACT CTTCCACGGT ATCGATAGAC AGCTATGTAT ATTGGAAGGT GAAGGGGTAA GACTAAATAT CAAGAGGAAT GATTTAGGAC AATCAGAGGA AATCATCCTT AGTCCGAATG AGCAGCCATT TTGCTTTAGC GGGGAAACTC AAATAGAGAG CAAACGATTA GCTAATCAGA TCCTAGACTT TAATGTGATG ACGAGGCGCG GCAACTACAC AGCAAGAATT GAGCGCATCG AGTGCAATGG CAAAGTCCAG ATTGAAACCA AAGATAACAG TGCTCAGCAA AGCGCGAATA CCCAGCCTAT CCAATTTTTG CTGCCGCTCG CGCCAATCCG CTGTATTTAT CAAGGAGAGA AGATAACGCT GCAAAGTTAC GATCTGTTGC AATTAGCAGA GGAGAAAAAC ACTACTGTGG AATGCTTAAC ATTGATAAGC CGCCAAACAA CGCAGCTGAT ACGCGTGTGT ATTGAAGCAA TCAGCCATCG ATAG
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Protein sequence | MNPNIQIIRY EECESSLWKN GGGSTKQLMI WPKGAELSNF DFRISIATIS SDGPFSLFHG IDRQLCILEG EGVRLNIKRN DLGQSEEIIL SPNEQPFCFS GETQIESKRL ANQILDFNVM TRRGNYTARI ERIECNGKVQ IETKDNSAQQ SANTQPIQFL LPLAPIRCIY QGEKITLQSY DLLQLAEEKN TTVECLTLIS RQTTQLIRVC IEAISHR
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