Gene Shewmr7_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1398 
Symbol 
ID4258567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1616858 
End bp1618210 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content45% 
IMG OID638122032 
Productphosphoglucosamine mutase 
Protein accessionYP_737454 
Protein GI114046904 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.033665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGGA AGTATTTTGG TACTGATGGT GTGCGTGGCA AAGTAGGTAC TTTCCCTATT 
ACGCCTGATT TTGCGATGAA GTTAGGTTGG GCTGCTGGGA CGGTACTTGC ATCTACTGGT
ACGAAAGAAG TTCTCATTGG CAAAGATACT CGCATTAGCG GTTATATGCT GGAATCGGCA
ATGGAAGCGG GTTTTTCTGC TGCTGGTGTA AATGTGGCTT TGATTGGCCC CATGCCAACG
CCTGCTGTGG CGTATTTAGC TTCAACCTTT AGAGCTGACG CTGGCGTGGT GATCAGTGCT
TCTCATAATC CTTTTTATGA TAACGGTATT AAGTTTTTTT CAAACACAGG TACCAAGCTA
AATGATGCAC AAGAGCTTGA AATTGAAGCT CTATTAGAAC AAGCGCTGGA ACATAATGCG
TTGCAATGTG TTGCTTCTGA AAAGCTAGGC AAAGTGCGCC GTATTGATGA TGCTGCGGGT
CGTTATATTG AGTTTTGTAA GGGAACCTTC CCTAATCATT TAAGCCTGGC GGGATTAAAG
ATTGTTGTCG ATAGTGCTCA TGGCGCTGCC TACCATATTG CACCGAACGT TTACCGTGAG
TTAGGGGCTG AGGTGATCAG TATTAATGAC AAACCCAACG GCGTGAACAT TAACGATCAT
TGCGGTGCGA CACATTTAGA TAGCTTGCAA TCTGCGGTGA TGATCCACGA AGCGGATTTA
GGTATTGCGC TCGATGGTGA TGCCGACCGA GTGATGTTTG TTGACCATAA TGGCCATGTT
GTTGATGGCG ATGAGATTTT ATTTATATTG GCGCAAGCGG CTTATCAAAA AGGTGAAATG
CAGGGCGGGG TAGTAGGCAC GTTAATGTCA AATCTTGGTT TAGAGCTAGC GCTTAAACAA
ATGGGCATTC CCTTTTTGCG GGCTAAAGTT GGTGACCGTT ATGTGGTTGA GCAGCTTAAA
GAAACGGGTT GGCAACTGGG TGGTGAAGGT TCTGGGCATA TTTTAAGTCT GCAACACGCT
TCAACGGGTG ATGGTATTGT GGCGTCCTTG CAGGTACTTA AAGCCATTTT AGAGTCGGGT
AAACGTTTAG CTGAACTAAA AGCTGGGATG ACTAAATTGC CACAAGTGCT TATCAATGTG
CGTTTAACCT CGGGTAGCGC TGATAGTATT TTGAGCAAAG ATAGTGTTAA GCAGGCCGTG
ATTACCGCAG AGGAAGTATT AGGTAACCAA GGTCGAGTGT TGTTACGCAA ATCAGGAACT
GAGCCCTTAA TCCGGGTGAT GGTAGAGTCA ACGGATATTA GCTTGACTCA ACAACAAGCC
GAATATATCG CTCAGGCCGT TAAAGTGGCA TAG
 
Protein sequence
MSRKYFGTDG VRGKVGTFPI TPDFAMKLGW AAGTVLASTG TKEVLIGKDT RISGYMLESA 
MEAGFSAAGV NVALIGPMPT PAVAYLASTF RADAGVVISA SHNPFYDNGI KFFSNTGTKL
NDAQELEIEA LLEQALEHNA LQCVASEKLG KVRRIDDAAG RYIEFCKGTF PNHLSLAGLK
IVVDSAHGAA YHIAPNVYRE LGAEVISIND KPNGVNINDH CGATHLDSLQ SAVMIHEADL
GIALDGDADR VMFVDHNGHV VDGDEILFIL AQAAYQKGEM QGGVVGTLMS NLGLELALKQ
MGIPFLRAKV GDRYVVEQLK ETGWQLGGEG SGHILSLQHA STGDGIVASL QVLKAILESG
KRLAELKAGM TKLPQVLINV RLTSGSADSI LSKDSVKQAV ITAEEVLGNQ GRVLLRKSGT
EPLIRVMVES TDISLTQQQA EYIAQAVKVA