| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1396 |
|---|
| Symbol | |
|---|
| ID | 4258565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1614506 |
|---|
| End bp | 1615579 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638122030 |
|---|
| Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
|---|
| Protein accession | YP_737452 |
|---|
| Protein GI | 114046902 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0774895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAA ACATTGCTGT TTTATTTGTT TTTTTAGTTT CTTTTATCAG TTTGTTTGTA
TTTCGCAAGG TCGCTCAACG AATTGGTTTG GTCGATAAAC CGAATGAGCG TAAACACCAT
ACTGGCCAAA TCCCCTTAGT CGGTGGGGTG AGTGTATTTT TCACAATGAT GTTGGTGTTG
TGGCTTATTC CTACGCTGTT AATTGAACCT GTATTGTATG CGAGCTGCGC TTTTATTCTT
GTGGTTATTG GTGCGATTGA TGACCGCTTC GATATTAGCT TTAAACTTCG TCTAGTGGTG
CAGGCAGTTA TATCACTTTT AATGATAGTT ATAGGGGAGC GAAGTTTGCA TAATCTTGGC
TATCTTATGG GGAGCGAGGC GATACATTTA CCAGAGCCAG TTAGTATTTT ACTGACTATC
TTTGCGGTTA TTGGCGCGAT AAATGCCTTT AATATGGTCG ATGGTATTGA TGGTTTGCTG
GGCGGTTTAG CGTCTGTCAC ATTTGGTGGC CTAGGTATTT TATTTTATCT GCATGGTATG
TATGGTTTTG CTATTTTTTG TGGTTTGCTG GTTACAGCTA TGCTGCCTTA TATCATGCTT
AATTTAGGTT TTCCGTTCGG GCGACGTTTT AAGGTGTTCA TGGGGGATGC GGGGAGCATT
TTTATCGGCT TTACTGTAAT TTGGTTGCTG ATTGTGGCCA GTCAGGGTGA GCGAGCTACC
GCCATTCGCC CGGTTACCGC ATTGTGGCTA ATTGCGTTAC CGCTGATGGA TATGGTGTGC
ATCATGATCC GCCGTATTCG TAAAGGCCAA TCGCCATTTA AACCCGACCG AGAGCATTTA
CACCATATTT GTCAACGTCT TGGATTAACC TCCCATATGT CACTCATGAT GATTTGCACA
GCTGCTGGGG CTATGGCTGC CATTGGTATT TGGTCTGAGC TTGCCAAAAT AGATGAAAAT
ATTATGTTTT ATGCATTTTT GGCTACTTTT GCTTGTTATT TTACGATAAT GAATAACATT
TGGCGTATTA CTGCATTTTT GCGTAGAGAC GTAAAGTTTT TTAAATCAAT TTAA
|
|---|
| Protein sequence | MSTNIAVLFV FLVSFISLFV FRKVAQRIGL VDKPNERKHH TGQIPLVGGV SVFFTMMLVL
WLIPTLLIEP VLYASCAFIL VVIGAIDDRF DISFKLRLVV QAVISLLMIV IGERSLHNLG
YLMGSEAIHL PEPVSILLTI FAVIGAINAF NMVDGIDGLL GGLASVTFGG LGILFYLHGM
YGFAIFCGLL VTAMLPYIML NLGFPFGRRF KVFMGDAGSI FIGFTVIWLL IVASQGERAT
AIRPVTALWL IALPLMDMVC IMIRRIRKGQ SPFKPDREHL HHICQRLGLT SHMSLMMICT
AAGAMAAIGI WSELAKIDEN IMFYAFLATF ACYFTIMNNI WRITAFLRRD VKFFKSI
|
|---|
| |