Gene Shewmr7_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1360 
Symbol 
ID4257725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1575364 
End bp1575633 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content49% 
IMG OID638121994 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_737416 
Protein GI114046866 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.798295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAG AAGCCCTAAT CGATATTTTC CGTGAGGCCT TAGCCGTGAT TGTCATGATG 
GTTTCGGCCA TCGTACTGCC GGGCTTGGGC ATTGGCCTCA TTGTGGCGGT GTTCCAAGCC
GCGACCTCAA TTAACGAACA GACTTTAAGC TTTTTGCCTC GACTGATAGT GACCTTACTG
GCCTTGATGG TTATGGGACA CTGGTTAGTG CAAACCCTCA TGGATTTCTT TATCGAAATG
GTTAACCGCA TTCCTCAAGT GGTGGGCTAA
 
Protein sequence
MTPEALIDIF REALAVIVMM VSAIVLPGLG IGLIVAVFQA ATSINEQTLS FLPRLIVTLL 
ALMVMGHWLV QTLMDFFIEM VNRIPQVVG