Gene Shewmr7_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1346 
Symbol 
ID4255418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1561774 
End bp1562856 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content51% 
IMG OID638121980 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_737402 
Protein GI114046852 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCC ATCCACTAGC GCAACTTGAA ACATTCAAGC ACACTAGCAA ACAATGGAAC 
CAACTGCGTG AGGCCGCCAA TATGTCCAAT CGGATGGAGC ATATTTTACA GGCTATGCCC
TCTGGCGTGG TGATTTTGAA CGGTGACGGT ATTGTCACCG ATGCAAACCC TGTTGCCGTG
GAATTGCTGG AGCAGCCGTT ATGCGGCGCC CGCTGGATTG ATGTGATCCA TACGGCGTTT
GCGCCACAGG ATGATGATGG TCATGAAGTC TCATTACGCA ATGGCCGCCG AGTCAAATTT
GCGATAACCC CATTAACGCC AGAACCGGGC CAATTAATTG TGCTGACGGA TCTAACAGAA
ACCCGTCTAC TGCAAAAGAA TCTTTCCCAT CTGCAGCGCC TATCAGCCCT CGGTAAAATG
GTCGCGACGC TGGCGCATCA GGTGCGTACG CCACTGTCGG CGGCACTGCT CTATGCTGCG
AATCTGGCCA GTCCTAAATT ATCAGAACCT GCTAAGGCAA AATTTCAGCA GAAGCTAGTG
GATAGACTCA ATGAGCTTGA ACGCCAAGTT AACGATATGC TGTTGATGGC CAAAGGGCGG
CAGGATGAAT TGGGTGAGTT AGTTAACCTT GATGAGGTGA TCAATACTGT CATGGCGAAC
TGCGAGCCGA TTGTGGCTCA GCGCGGCGCA GCATTGACTG TCACTAATGT GTCCAGCGGC
TTAATGCTAG CGAATGTGAA TGCGCTCAGT TCTGCCGTTA ATAATCTGGT GATGAACAGC
CTTGAAGCTG GGGCTACGCA AATTCAAATC GTCGCCAATG ATGTCGGCGA GCAGTTAGCC
CTCAATGTGG TCGACAACGG TAAAGGGCTG GATGCCAAGA TGCAGCAAAA AGTGTTGGAG
CCTTTCTTTA CCACCAAAGC ACAAGGAACA GGTCTAGGCT TAGCCGTTGT GCAGTCAGTG
GTTCGCAATC ATGGCGGACA AATCCAATTG AGTTGTATGC CAAATAACGG TTGTACTGTG
TCGCTAACCT TCCCGCAGGC GAAATCGGCT ACCGTATTGC CGCTGGAGAA ACCCTATGTC
TGA
 
Protein sequence
MSAHPLAQLE TFKHTSKQWN QLREAANMSN RMEHILQAMP SGVVILNGDG IVTDANPVAV 
ELLEQPLCGA RWIDVIHTAF APQDDDGHEV SLRNGRRVKF AITPLTPEPG QLIVLTDLTE
TRLLQKNLSH LQRLSALGKM VATLAHQVRT PLSAALLYAA NLASPKLSEP AKAKFQQKLV
DRLNELERQV NDMLLMAKGR QDELGELVNL DEVINTVMAN CEPIVAQRGA ALTVTNVSSG
LMLANVNALS SAVNNLVMNS LEAGATQIQI VANDVGEQLA LNVVDNGKGL DAKMQQKVLE
PFFTTKAQGT GLGLAVVQSV VRNHGGQIQL SCMPNNGCTV SLTFPQAKSA TVLPLEKPYV