Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1346 |
Symbol | |
ID | 4255418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1561774 |
End bp | 1562856 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121980 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_737402 |
Protein GI | 114046852 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCC ATCCACTAGC GCAACTTGAA ACATTCAAGC ACACTAGCAA ACAATGGAAC CAACTGCGTG AGGCCGCCAA TATGTCCAAT CGGATGGAGC ATATTTTACA GGCTATGCCC TCTGGCGTGG TGATTTTGAA CGGTGACGGT ATTGTCACCG ATGCAAACCC TGTTGCCGTG GAATTGCTGG AGCAGCCGTT ATGCGGCGCC CGCTGGATTG ATGTGATCCA TACGGCGTTT GCGCCACAGG ATGATGATGG TCATGAAGTC TCATTACGCA ATGGCCGCCG AGTCAAATTT GCGATAACCC CATTAACGCC AGAACCGGGC CAATTAATTG TGCTGACGGA TCTAACAGAA ACCCGTCTAC TGCAAAAGAA TCTTTCCCAT CTGCAGCGCC TATCAGCCCT CGGTAAAATG GTCGCGACGC TGGCGCATCA GGTGCGTACG CCACTGTCGG CGGCACTGCT CTATGCTGCG AATCTGGCCA GTCCTAAATT ATCAGAACCT GCTAAGGCAA AATTTCAGCA GAAGCTAGTG GATAGACTCA ATGAGCTTGA ACGCCAAGTT AACGATATGC TGTTGATGGC CAAAGGGCGG CAGGATGAAT TGGGTGAGTT AGTTAACCTT GATGAGGTGA TCAATACTGT CATGGCGAAC TGCGAGCCGA TTGTGGCTCA GCGCGGCGCA GCATTGACTG TCACTAATGT GTCCAGCGGC TTAATGCTAG CGAATGTGAA TGCGCTCAGT TCTGCCGTTA ATAATCTGGT GATGAACAGC CTTGAAGCTG GGGCTACGCA AATTCAAATC GTCGCCAATG ATGTCGGCGA GCAGTTAGCC CTCAATGTGG TCGACAACGG TAAAGGGCTG GATGCCAAGA TGCAGCAAAA AGTGTTGGAG CCTTTCTTTA CCACCAAAGC ACAAGGAACA GGTCTAGGCT TAGCCGTTGT GCAGTCAGTG GTTCGCAATC ATGGCGGACA AATCCAATTG AGTTGTATGC CAAATAACGG TTGTACTGTG TCGCTAACCT TCCCGCAGGC GAAATCGGCT ACCGTATTGC CGCTGGAGAA ACCCTATGTC TGA
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Protein sequence | MSAHPLAQLE TFKHTSKQWN QLREAANMSN RMEHILQAMP SGVVILNGDG IVTDANPVAV ELLEQPLCGA RWIDVIHTAF APQDDDGHEV SLRNGRRVKF AITPLTPEPG QLIVLTDLTE TRLLQKNLSH LQRLSALGKM VATLAHQVRT PLSAALLYAA NLASPKLSEP AKAKFQQKLV DRLNELERQV NDMLLMAKGR QDELGELVNL DEVINTVMAN CEPIVAQRGA ALTVTNVSSG LMLANVNALS SAVNNLVMNS LEAGATQIQI VANDVGEQLA LNVVDNGKGL DAKMQQKVLE PFFTTKAQGT GLGLAVVQSV VRNHGGQIQL SCMPNNGCTV SLTFPQAKSA TVLPLEKPYV
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