Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1343 |
Symbol | |
ID | 4255415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1557814 |
End bp | 1559169 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638121977 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_737399 |
Protein GI | 114046849 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTT TAACTGCAAG CGGTATTGGT TCAGGGCTTG ATATTGGTGG CATAGTTTCG GCTTTGGTAA ACGCTGAAAA GGCTCCCAAA GAGGCGCAAT TCAATAAGAC AGAAGGCCTT GTTAATACTC AAATCTCGGC TCTAGGCGCA TTAAAAAGTA GTATTTCTGA TTTTTTGGAT AAATTAAAGC CATTGTCTGA AGCCAAAACT TTTACTGGGT TTACTTCTAA GTTATCTAAA AGTGACTATT TGTCGGCCAA GACTGATTCC GATGCTGTTG CAGGCAGTTA TAACTTAGTG GTTGAGCAGC TCGCTCAAAG TCAGAAAGTG GGCTCTGCAA ATGTTACCGA TGTGACTGCG CCAATTGGTA GTGGCTCTCT GGCAATTGAT GTCGCTGGAA AAAGCTTCTC CGTCGATGTT GCGAGCGGTG ATTCGCTTCA GGATATTGTA AAAAAAATCA ATAAGGCTGA CGATAATGTT GGGGTAACGG CCACCATCAT CAACAGTGAT GCTGGGCCAC AGATGGTTCT GACATCTAAT AAAACGGGCA CTGCAAATCA AATCCAGGTG ACAGCAAACG ATGATACAGG TACAGCCCTT GCCGATACCT TTACAATGAC AGAGGTACAG GGGGCCAAAG ATGCCATACT GTATGTGGAT GGCCTAAAGG TGACATCAAA TTCTAATGAG GTTAAGGATG CAATACAGGG CGTTACTTTG ACTCTTAAAG ATGCCGATGT CGATAAATCT ACCACATTGA CAATTGAGCA AGATAAGGCG TCTGCAACCA AAGCCATAAA GGAGTTTGTT GAGTCTTATA ACACAATGAC AAGCACAGTG AAGGGGGTGT CGGGTTATGA TCCTAAAACT AAACAGGTGG GAATATTCCA AGGCGACTCT CTTATTCGTA GTTTGCAAAG CCAGTTTCGA GGAGTGATCT CTTCCTCCTA TGGCGATGGT ATGGCGCTAG CAAACCTAGG CATTAAAACC ACACGTGATG GAACCTTGGA GCTGGATGAG GATACCTTAA AAAAAGCACT TGAGAATGAT ATAAGTGCAG TGGCCGATTT CTTTACCACA GAGGGAACCG GATTTGCTGC CAAAATGACT AGTGTGGGTG AAGCATATAC TCAATCAGGG GGATTGCTTG ATAGCCGTGA TGAAACATTG GATAACCGAC TTTCCCGTCT AGGTGATGAA AGAGCTGCTT TTTCGTTGAA AATGAAAGCC TATGAAGCTC GGCTTACTAA GCAGTTTAAT GCAATGGATT TGATGGTTGG CCAGCTTAAT TCGCAAGGTA GTACTATTCA GGCTCGTATC GATTCGTTAC CTGGATTAGT CTCAAATAAG AAATAA
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Protein sequence | MAGLTASGIG SGLDIGGIVS ALVNAEKAPK EAQFNKTEGL VNTQISALGA LKSSISDFLD KLKPLSEAKT FTGFTSKLSK SDYLSAKTDS DAVAGSYNLV VEQLAQSQKV GSANVTDVTA PIGSGSLAID VAGKSFSVDV ASGDSLQDIV KKINKADDNV GVTATIINSD AGPQMVLTSN KTGTANQIQV TANDDTGTAL ADTFTMTEVQ GAKDAILYVD GLKVTSNSNE VKDAIQGVTL TLKDADVDKS TTLTIEQDKA SATKAIKEFV ESYNTMTSTV KGVSGYDPKT KQVGIFQGDS LIRSLQSQFR GVISSSYGDG MALANLGIKT TRDGTLELDE DTLKKALEND ISAVADFFTT EGTGFAAKMT SVGEAYTQSG GLLDSRDETL DNRLSRLGDE RAAFSLKMKA YEARLTKQFN AMDLMVGQLN SQGSTIQARI DSLPGLVSNK K
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