Gene Shewmr7_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1341 
Symbol 
ID4255413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1555845 
End bp1557248 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content45% 
IMG OID638121975 
Productflagellin domain-containing protein 
Protein accessionYP_737397 
Protein GI114046847 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA CCGTAAATAC CAACGTGACC TCTTTAGGCT CACAAAAGAA CTTGAATAAA 
GCCAACAGTG CATTGCAAAC CTCTATGGAG CGTCTGTCAT CTGGCTTGCG TATTAACAGT
GCCAAAGATG ATGCGGCGGG TCTGCAAATT TCTAACCGTT TGACCAGTCA GATCAACGGT
CTTGATGTCG CACAACGAAA TGCTAACGAT GGTATCTCGA TTGCGCAAAC CGCTGAAGGT
GCGATGCAAA CCTCTACCGA TATTTTGCAA CGTATGCGTG ATCTATCATT GCAGTCAGCT
AACGGCTCAA ACTCAGCAGA TGACCGCGCG GCAATGCAAA AAGAGATTTC ATCTTTGCAA
ACAGAATTAA CCCGTATTGC CGATACAACT TCATTTGGTG GGCAGAAGTT GCTGGATGGT
ACGTACGGTA CTCAGAAATT TCAAGTGGGT TCAAACGCTA ATGAAACCAT TTCAATTTCT
CTAGGCGATG TATCTTCTAA CAAACTTGGC AATAACACAA TTTCAGGTGC AGGTTCGGTT
TTAGGGGTTG CGGCCACTGA TACGCTTTCA AATAGTGTTG CTTTTACTGC AGGTGACATC
AAAGTAAATG GTAAGACTGT AGCGGTTGCT GCTGCGGATA CTGCTACTTC TCTTGCTGAC
AAGATCAACG CCACAGGTTC GGGCGTTAAA GCGGAAGCCA AGCTTTCCAC AACGATTGAA
GGTTTGAGTT CAACAGATAC TGGTACCCTT ACTGTTTATG ATGCGGAGGG TAATGCTGAC
AGCTATGATC TATCAACCTA CAACGGTGAT GCAAAAACGC TTGCTTCGGA CTTAGGGAAA
GCGGGATATG ATGTCAGCTA CGATGCTGAT ACTGGAAAGA TTGGCTTCTC AGCAACGGGT
GTACAGGGTA TTGAAATTTC TGGTGGTGTA GTAGGTGGAA CTGTAAGTTT AGGTGGTAAT
GTTGCAGATG ACACTAATAC AAATGTGAGT GTAGCTTCCA GTTTGACACT ATCTTCACCA
GATAAGTTTA CTGTGACTGA TGATGGTACG GCAGATCTTG GCGAAATTCT GAGTGGTGGC
ACATCAGAAC TGAATAAAGT AAGCGATATT GATATCAACA CTGCCAAAGG TGCTCAAGAT
GCAATTTCGG TAATTGATGC GGCGATTGCT GGTATTGATA GCCAACGTGC CGATTTGGGT
GCGGTGCAGA ACCGCATGAA CTTTACCATC AACAACTTGA GCAATATTTC GACTAACGTG
TCTGACGCAC GTAGTCGTGT GCAAGATGTG GATTTTGCAA AGGAAACTGC TCAAATGACT
AAGCAGCAGA TTCTGTCACA AACCTCATCT GCGATGTTGG CACAGGCGAA CCAACTTCCT
CAAGTGGCCT TGTCACTGCT GTAA
 
Protein sequence
MAITVNTNVT SLGSQKNLNK ANSALQTSME RLSSGLRINS AKDDAAGLQI SNRLTSQING 
LDVAQRNAND GISIAQTAEG AMQTSTDILQ RMRDLSLQSA NGSNSADDRA AMQKEISSLQ
TELTRIADTT SFGGQKLLDG TYGTQKFQVG SNANETISIS LGDVSSNKLG NNTISGAGSV
LGVAATDTLS NSVAFTAGDI KVNGKTVAVA AADTATSLAD KINATGSGVK AEAKLSTTIE
GLSSTDTGTL TVYDAEGNAD SYDLSTYNGD AKTLASDLGK AGYDVSYDAD TGKIGFSATG
VQGIEISGGV VGGTVSLGGN VADDTNTNVS VASSLTLSSP DKFTVTDDGT ADLGEILSGG
TSELNKVSDI DINTAKGAQD AISVIDAAIA GIDSQRADLG AVQNRMNFTI NNLSNISTNV
SDARSRVQDV DFAKETAQMT KQQILSQTSS AMLAQANQLP QVALSLL