| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1307 |
|---|
| Symbol | |
|---|
| ID | 4258056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1515400 |
|---|
| End bp | 1516068 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638121940 |
|---|
| Product | tRNA-adenosine deaminase |
|---|
| Protein accession | YP_737363 |
|---|
| Protein GI | 114046813 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.35104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCAGA CAAAACTGAA CCTCAAAATC CTGCATGCGA AGACGCTCAG CTCTGATGAA
CTTGGCGCTG ATGAACTTGG TTGTGATGAA GCTAGTGGTT ATGTGCTTGT TGGCGAGCAA
CCTTGTCTCA ATCAAGCAAG TCTCAATCAA GCGGATGTTG AACAAGCTCG AGTCGATGAA
CATTGGATGC GTGTCGCGAT GGCCATGGCG GAAAAGGCCG AGGCGGCGGG TGAAGTACCA
GTGGGGGCGG TTTTAGTCAA AGAGGGTCAG CAAATCGCGG CTGGATATAA CTTGTCTATC
AGTGAGCACG ACCCTTGCGC CCATGCTGAA ATTCAGTGTT TGCGAGCGGC GGGGCAAACG
ATTGAAAACT ATCGACTCCT CGATACCACT CTTTACGTTA CTCTTGAGCC TTGTGCGATG
TGCGCCGGAG CTATGGTGCA TAGCCGGATT GCCCGCGTGG TATTTGGGGC AAAGGATGAG
AAGACGGGCG CCGCAGGAAC CGTGCTTAAC CTCTTGCAGC ATCCAGCCTT TAATCATCAA
GTTGAGGTGG CGTCTGGGGT GTTAGCGCAG GACTGTGCTG ACCAATTGAG CCGCTTTTTT
AAACGTCGCA GGGAGGAAAA GAAGGCTTTA AAACAGGCTC AAAAGGCGCA GCAGGGGACG
CTATCCTAA
|
|---|
| Protein sequence | MEQTKLNLKI LHAKTLSSDE LGADELGCDE ASGYVLVGEQ PCLNQASLNQ ADVEQARVDE
HWMRVAMAMA EKAEAAGEVP VGAVLVKEGQ QIAAGYNLSI SEHDPCAHAE IQCLRAAGQT
IENYRLLDTT LYVTLEPCAM CAGAMVHSRI ARVVFGAKDE KTGAAGTVLN LLQHPAFNHQ
VEVASGVLAQ DCADQLSRFF KRRREEKKAL KQAQKAQQGT LS
|
|---|
| |