| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1293 |
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| Symbol | |
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| ID | 4258025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1497097 |
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| End bp | 1497990 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638121926 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_737349 |
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| Protein GI | 114046799 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.585298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCTG TGATGAGCCT AGATGGCTTG ATAGTGCTCG ATGCTATTGA TAAGAAAGGT
AGTTTTTCGG CGGCGGCCGA ATCCTTATTC CGGGTGCCAT CGGCGCTGAC CTACACAGTG
CAGAAATTAG AGAGCGACCT AGGGGTAAAA TTATTTGAAC GTAAGGGCCA GCGCGCCGAA
TTGACCTTAG TTGGCCTGCT AGTATTACGC CAAGGGCGGG AGATTTTAGC CGCCACCGCC
AGGCTTGAGG AAGCGGTTCG GCAACTCGAA ACGGGCTGGG AGTCGGCATT AACCTTAGCC
ATAGATACTG TGGTGCCCGA TTTACCACTG CTTAAACTGA TTGCTGAATT TACCGAGTTA
GGTAAACAGG TGACCATCAA TATCACCGAG GAGTCATTGG GTGGCGGTTG GGATGCGCTG
TATTCGGGCC GCGCCGATAT TGCCATTGGG GTCACGGGGG AGTTACCTAA GGGGCAATAT
CACTTAGTCG AAATCGGCAT GCTTGAATTC GTGTTTGCCC TTGCGCCTCA CCATCCCTTG
GCGCAGTTTG ACCATCCCAT CTCGACCAAA GCCCTGTTGC AATTTCCCTC CGTGGTGGTG
GCCGACAGCT CAACGGCGCT GGCGCAGCGC TCAAGTGGAT TGTTTGATAG TCGCCAAGTC
ATCCGCGTGC CGAACATGCA GACCAAGATT AAAGCGCAGC AACTCGGGCT GGGTGTAGGT
TATCTTCCCA AACATTTGAT CCGCGAAGAA CTCGCATCAG GCGCGTTAGT CGCGTGTAAG
GTTGAGATCC CAAGACCGGC GCAGCCGGTG TTTCTCGCAT GGCGCAAGGG GAATCAAGGC
AAAGCGCAGG CGTGGTTTGC CGAACGTTTA CCCCATTGCG ACTGGTTGTT TTAG
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| Protein sequence | MLPVMSLDGL IVLDAIDKKG SFSAAAESLF RVPSALTYTV QKLESDLGVK LFERKGQRAE
LTLVGLLVLR QGREILAATA RLEEAVRQLE TGWESALTLA IDTVVPDLPL LKLIAEFTEL
GKQVTINITE ESLGGGWDAL YSGRADIAIG VTGELPKGQY HLVEIGMLEF VFALAPHHPL
AQFDHPISTK ALLQFPSVVV ADSSTALAQR SSGLFDSRQV IRVPNMQTKI KAQQLGLGVG
YLPKHLIREE LASGALVACK VEIPRPAQPV FLAWRKGNQG KAQAWFAERL PHCDWLF
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