| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1283 |
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| Symbol | |
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| ID | 4258173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1489478 |
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| End bp | 1490971 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638121916 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_737339 |
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| Protein GI | 114046789 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTTA TTAGCATGTT AACCCTTGTA TCTAAGGAGT CATTCTTGTT AAGACCTTTA
TCGCTCCTAT TTATTGGATT TGGGTTAACG CTAGCAACAT CAGCCTTAGC GGAATTTTCC
TTAGCACAAA TTCCGCCCCT ATCGAATAAA ACCCCCATCA CTTTAGTCGC CGAAAAAGGC
TTTTGGACTG ATTACCTGAC ACGGGAAATG TTGCCTAAAT TTACCGAAAA AACTGGTGTT
AAAGTCAATG TGGTCAGTAC CGAACTAGAA GGCATGTTCG AGCTACAAAC CCACGCATTA
CTGCAAGGCG AAGGAAAATA TGATCTGCTG AGCATGGAGG CTGGCTGGGC AAAAGAGTGG
GCGGCTAACG GCTATACTGT TCCCCTGTTG GAATTAGCCA AACTCTACGA TCCCGATGGT
GAAAAGGCGA TGGAAAGCTA TCTCGAACCT TACTATCTGT CGCTACTTAA TATTTTGTCC
TATCACGGCG AGCTACATGC CATCCCCTAC AATAACTATG TGATGGGGAG TCATTACCGC
GCGGATTTAT TTGAGAATAA AACCGAACAA GCTCAGTTTC AGCAACGCTT TGGTTACCCA
CTCAAACCCG CGACTAATTT CGATGAACTA CAGGACCAAG CGGTATTTTT TACCCGAAAA
GCAGGCGAAC TGCTTGCGGG CAAGCCCTTA AGCCACGACT TTTATGGCTT GGCATTAATG
TCTGGCAACA AGCCCCATAT TAACGATGAA TTTTCGAGTA TTATTTGGAG CTTAGGTGGC
GCTTGGATGT GGCCCATCTA TAACCCACAA AAACAGCTAA CCCATTTCGA GGTCCCAGCC
GTTAATCTAG AGGCGATAAA AGCGGGAAGC ATTTACCGAA AGCTGATGCC CTACGCCATT
CCTGCGGATG ATAAGTTTGC CTTCAATGAA GCGGCCAATG CACTGGCAAG CGGACAAGTG
GCGATTTGGC CCTTTGCCTA CAACAATCTC TGGTCGGTCT CCTTTAAAGT CGAGGCCAAT
GTGCCAGGCG CTCGGCTTGG CGTGGCTCAA GTGCCTGGCG GCATGCCCTA TAACGGTGCC
TACGCTTTTG CCGTGAGCTA CGACAGTAAA AATCCGCAAG CCGCCTATTG GTTACTCAAA
TACATGGGCA CCTATGAAGC CCAATATGCC TACGCCCTCG GCGGCGGCAA TCCCTGCAGA
ATGGATGTGG TCACAGCGCC AGAATTTAAA CAAGCCTCTA AGAGATCCAT TGCTGGCGCC
TTTGAGGCGA GCCAAATTGC TAACTTATTT TGGTCTACTA AAGTATTGGA AGTAGGACAC
TTTACCACTA CCGCTATGGG GCAGATTTAT CCCGAATTAA GTCATGCTTG TTATGCAGCA
AGCCGACACG AAGCCAACAG TACCGATATT TTTATTGAGT TAAGCAGCAA AATTAAACAC
CTGCAGAATA CCTATGGGGA AGTGCCTGCA ATTGATAAGA AAAATAACCA ATGA
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| Protein sequence | MLLISMLTLV SKESFLLRPL SLLFIGFGLT LATSALAEFS LAQIPPLSNK TPITLVAEKG
FWTDYLTREM LPKFTEKTGV KVNVVSTELE GMFELQTHAL LQGEGKYDLL SMEAGWAKEW
AANGYTVPLL ELAKLYDPDG EKAMESYLEP YYLSLLNILS YHGELHAIPY NNYVMGSHYR
ADLFENKTEQ AQFQQRFGYP LKPATNFDEL QDQAVFFTRK AGELLAGKPL SHDFYGLALM
SGNKPHINDE FSSIIWSLGG AWMWPIYNPQ KQLTHFEVPA VNLEAIKAGS IYRKLMPYAI
PADDKFAFNE AANALASGQV AIWPFAYNNL WSVSFKVEAN VPGARLGVAQ VPGGMPYNGA
YAFAVSYDSK NPQAAYWLLK YMGTYEAQYA YALGGGNPCR MDVVTAPEFK QASKRSIAGA
FEASQIANLF WSTKVLEVGH FTTTAMGQIY PELSHACYAA SRHEANSTDI FIELSSKIKH
LQNTYGEVPA IDKKNNQ
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