Gene Shewmr7_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1262 
Symbol 
ID4258187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1471091 
End bp1471639 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID638121895 
Productprotein of unknown function YGGT 
Protein accessionYP_737318 
Protein GI114046768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0091593 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TAACCTTTTT GATCAGCACA CTCTTCGATT TGTATTTGAT GGTGGTGATA 
TTACGGATCT GGCTACCTTT GGCCCGTGCC GATTTTTATA ATCCCTTTAG TCAATTTATC
GTTAAGGCAA CCCATCCGTT GATCGCGCCT ATGCGTCGGT TAATCCCTTC AATAGGAAGA
TTCGATACCT CCTCATTTGT ACTCGCCCTA TTAGTCGTGA TGGTCAAAGT GCTGCTGTTA
AGCCTTATCG CCGGTGGTGG CATTGATATA GTGCTGTTCT TTGTGTTTGC GCTTGTCACT
GTTATCAAAC AGGCGGGCGT TTTGCTCTTC TGGATGCTGC TCATCCGCGC CATCTTAAGC
TGGTTCAATC AAGGCTATAA CCCGATAGTG ATGATCATGG GACAACTAAC AGAGCCCATT
TTGGCTCCAG TGCGCCGTAT CATTCCGCCC ATTGGTGGTT TAGATTTGTC GGTGATGTTG
GTGATTATCG GCATGAACTT TATCAACATG CTATTGGCGC AATACGTACC ATTTTGGGCC
GTGATTTAA
 
Protein sequence
MNALTFLIST LFDLYLMVVI LRIWLPLARA DFYNPFSQFI VKATHPLIAP MRRLIPSIGR 
FDTSSFVLAL LVVMVKVLLL SLIAGGGIDI VLFFVFALVT VIKQAGVLLF WMLLIRAILS
WFNQGYNPIV MIMGQLTEPI LAPVRRIIPP IGGLDLSVML VIIGMNFINM LLAQYVPFWA
VI