Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1262 |
Symbol | |
ID | 4258187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1471091 |
End bp | 1471639 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638121895 |
Product | protein of unknown function YGGT |
Protein accession | YP_737318 |
Protein GI | 114046768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0091593 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAT TAACCTTTTT GATCAGCACA CTCTTCGATT TGTATTTGAT GGTGGTGATA TTACGGATCT GGCTACCTTT GGCCCGTGCC GATTTTTATA ATCCCTTTAG TCAATTTATC GTTAAGGCAA CCCATCCGTT GATCGCGCCT ATGCGTCGGT TAATCCCTTC AATAGGAAGA TTCGATACCT CCTCATTTGT ACTCGCCCTA TTAGTCGTGA TGGTCAAAGT GCTGCTGTTA AGCCTTATCG CCGGTGGTGG CATTGATATA GTGCTGTTCT TTGTGTTTGC GCTTGTCACT GTTATCAAAC AGGCGGGCGT TTTGCTCTTC TGGATGCTGC TCATCCGCGC CATCTTAAGC TGGTTCAATC AAGGCTATAA CCCGATAGTG ATGATCATGG GACAACTAAC AGAGCCCATT TTGGCTCCAG TGCGCCGTAT CATTCCGCCC ATTGGTGGTT TAGATTTGTC GGTGATGTTG GTGATTATCG GCATGAACTT TATCAACATG CTATTGGCGC AATACGTACC ATTTTGGGCC GTGATTTAA
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Protein sequence | MNALTFLIST LFDLYLMVVI LRIWLPLARA DFYNPFSQFI VKATHPLIAP MRRLIPSIGR FDTSSFVLAL LVVMVKVLLL SLIAGGGIDI VLFFVFALVT VIKQAGVLLF WMLLIRAILS WFNQGYNPIV MIMGQLTEPI LAPVRRIIPP IGGLDLSVML VIIGMNFINM LLAQYVPFWA VI
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