| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1257 |
|---|
| Symbol | |
|---|
| ID | 4258182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1466097 |
|---|
| End bp | 1467944 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638121890 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737313 |
|---|
| Protein GI | 114046763 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0275437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAA AAACGAACAT CAGCTTAGTC GCATTTACTC TCTCCACCCT GCTTGCACTG
CCTTCTCATG CGGTGCCCAC CTTAAGTGAC TCACATCATG TGGCCAGTAC CAGTGTTGCC
GCCCAAAGCG AGTCAGAAAA AGCCAATGCC TTGTTTGAAA CCATCTTCAT GGAAAACATC
ATGGCAAGCC CCATTGCGCA AACCTATATG GGCATTAAGC AGGACTATGG TAAGTGGGAC
GACATTGGCG ATGAGGCGGA TGCCCGTGAG TTGGCGCGAA CCAAGAAACA GCTAGCCGAA
GTGAATCAAC TGGATGCGAG TAAGCTTGAT CCACAAACTC GCCTAAGCCT GACGTTACTC
ACTCAAAACC TGAATAACGA TATCAAAGAC TATCAGTGGC GTTACCATAA CTACCCAGTG
AATCAGATGC ATGGTGGCCA CTCGATGATA GCCTCCTTCC TGATTAATCA ACACCAGATC
ACCGATGTCA GCGATGCTAA GGCCTATATC AGCCGCTTAA ATGGCGTGCC TAAACGCTTA
AGCCAACTGC AACAGGCGCT CGAGATCCGC GCAGATAAAG GCATTATTGC CCCTAAATTT
GTGTTCGGTT ACGTGATTTC TGACAGCCAA AACATCATTA AAGGCGCCCC CTTCGATAAA
GGCGAAGACA GTGCGTTGTT GGCGGATTTT CGCAAAAAAG TTAATGCGCT CAACATCTCT
GAAACAGAAA AAGCCCAACT GATTGCCGAT GCTGAAAAAG CACTCGTCTC ACAAGTTGAG
CCCGCATACA AGACGCTTAT CGCCTATATC AAAACCTTAG AAGTCAAGGC CGATACCCGC
GATGGTGTTT GGAAACTCCC CGACGGCGAG GCGTTTTATA ACAATGCCCT TGCACGTACG
ACCACTACCC ACATGACGGC AGATGAAATC CATCAACTTG GTCTTGCCGA AGTGGAACGC
ATCCATAATG AAATGCGCGC CATCATGAAA AAGGTGAATT TTAACGGCAC CTTGCAAGAG
TTCTTCACCT TTATGCGCGA TGATCCGCAG TTCTATTATC CAAATACCGT CGAAGGCAAG
GCGGCATATT TAGCCGATGC AACCAAGCTT ATCGATAATA TGCGCTCACG CTTGGATGAA
GTCTTTAAGG TCAAGCCAAA GGCAGCCATG ATAGTCAAAC AGGTTGAAGC CTTTAGGGAA
AAATCCGCTG GTAAAGCCTT CTATGAACAA CCGGCTCCCG ATGGCTCTCG CCCTGGTAGC
TACTATGCCA ACCTCTACGA TATGAAAGCC ATGCCTAAAT ACCAGATGGA AGCACTGGCT
TACCACGAAG GGATCCCTGG CCATCATATG CAAATCGCTA TCTCACAGGA GCTAAAGGAT
ATTCCTAAGT TCCGTAAATT CGGTGGCTAT ACCGCCTATA TCGAAGGTTG GGGGCTCTAC
AGTGAATCTT TCCCGAAGGA GATGGGCTTA TATGCCGACC CTTACTCCGA TTTTGGTCGA
CTGGCGATGG AGTTATGGCG AGCTTGTCGT TTAGTGGTCG ATACAGGGAT CCACGCCAAG
AAATGGACCC GCGAACAAGG GATAGCTTAT TACGTCGATA ATACTCCTAA CGCAAAATCC
GATGCGAAGA AAATGGTAGA GCGTCATATT GTTATGCCAT CTCAAGCCAC AGCCTATAAA
GTTGGGATGA TTAAGTTACT CGAACTGAGA CACAAGGCGG AAAAACAACT GGGTGATCAG
TTTGATATCC GGGATTTCCA TACTTTAGTC TTGGCTAACG GGGCACTGCC CTTGGATGTG
CTAGAAGAGC AAGTCGATCA ATGGATTGCC AGCGTTAACA AAGCCTAA
|
|---|
| Protein sequence | MPIKTNISLV AFTLSTLLAL PSHAVPTLSD SHHVASTSVA AQSESEKANA LFETIFMENI
MASPIAQTYM GIKQDYGKWD DIGDEADARE LARTKKQLAE VNQLDASKLD PQTRLSLTLL
TQNLNNDIKD YQWRYHNYPV NQMHGGHSMI ASFLINQHQI TDVSDAKAYI SRLNGVPKRL
SQLQQALEIR ADKGIIAPKF VFGYVISDSQ NIIKGAPFDK GEDSALLADF RKKVNALNIS
ETEKAQLIAD AEKALVSQVE PAYKTLIAYI KTLEVKADTR DGVWKLPDGE AFYNNALART
TTTHMTADEI HQLGLAEVER IHNEMRAIMK KVNFNGTLQE FFTFMRDDPQ FYYPNTVEGK
AAYLADATKL IDNMRSRLDE VFKVKPKAAM IVKQVEAFRE KSAGKAFYEQ PAPDGSRPGS
YYANLYDMKA MPKYQMEALA YHEGIPGHHM QIAISQELKD IPKFRKFGGY TAYIEGWGLY
SESFPKEMGL YADPYSDFGR LAMELWRACR LVVDTGIHAK KWTREQGIAY YVDNTPNAKS
DAKKMVERHI VMPSQATAYK VGMIKLLELR HKAEKQLGDQ FDIRDFHTLV LANGALPLDV
LEEQVDQWIA SVNKA
|
|---|
| |