Gene Shewmr7_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1253 
Symbol 
ID4258178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1461866 
End bp1462192 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content44% 
IMG OID638121886 
Producthypothetical protein 
Protein accessionYP_737309 
Protein GI114046759 
COG category[S] Function unknown 
COG ID[COG3171] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000738025 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.482824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA ATCGTAGCCG TCGTTTACGT AAGAAAATGC GCGTTGATGA ATTCCAAGAG 
TTAGGTTTTG ACATTACTTG GACCTTCGAT GCATCAGTCT CTGAAGCCGA TATTGATGCA
ACAGTCGATA AGTTTATCGA TGAAGTCATT GAAGCCCGTA AGTTAGGTTT CCACGGCGGT
GGTCATATCG AGTGGGAAGG TATTATTGCT ACCCAAACTA TCGGTAAGTG CACCGAAGAA
GATGTTGCTG CAGTGAAGGC TTTCTGGGCG GGTCAAAAAG TGACTCAACT TGAAGTTAGC
GATCTGTACG ATATCTGGTG GAGTTAA
 
Protein sequence
MAKNRSRRLR KKMRVDEFQE LGFDITWTFD ASVSEADIDA TVDKFIDEVI EARKLGFHGG 
GHIEWEGIIA TQTIGKCTEE DVAAVKAFWA GQKVTQLEVS DLYDIWWS