Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1248 |
Symbol | |
ID | 4258732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1458300 |
End bp | 1458851 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638121881 |
Product | cytochrome B561 |
Protein accession | YP_737304 |
Protein GI | 114046754 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00191634 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.790409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGAA ATACTAAGTT GAATTATGGA CTTATTGCTA TTGCCAGCCA TTGGCTGAGT GCGGTTGCGG TAATTGGACT CTTTGCCGTC GGTGTGTGGA TGGTGGAATT GACTTACTAC AGTGCCTGGT ACAAAACGGC GCCACATTGG CATAAAAGTA TTGGAATTTT ACTGCTGGCG GTAACGCTGT TTCGTTTAGT TTGGCGTTTG GTCAACCCAA AGCCTGCTCC TGAGCAAAAC CATCAGACAT GGGAAAAGGT GAGCGCCCAC ATTGCCCATG GCGCGATTTA CCTCTTATTA CTGGTGATTA TGGCCGCTGG TATTTTGATT TCGACGGCAG AGGGCCGTGG AATTATGGTG TTTGACTGGT TTGAGTTACC CGGCCTAACG CCACTGATTG AAAATCAGGC TGATATAGCC GGAGATATTC ATCAATATGC CGCCTACAGC TTGATTGCTC TGGTTTTACT GCATGCGTTA GGCGCGTTAA AGCACCATTT TATCGATAAA GATTCAACAC TACTCAAGAT GATTAAATTT AACCGAGGAT AA
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Protein sequence | MFRNTKLNYG LIAIASHWLS AVAVIGLFAV GVWMVELTYY SAWYKTAPHW HKSIGILLLA VTLFRLVWRL VNPKPAPEQN HQTWEKVSAH IAHGAIYLLL LVIMAAGILI STAEGRGIMV FDWFELPGLT PLIENQADIA GDIHQYAAYS LIALVLLHAL GALKHHFIDK DSTLLKMIKF NRG
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