Gene Shewmr7_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1248 
Symbol 
ID4258732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1458300 
End bp1458851 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID638121881 
Productcytochrome B561 
Protein accessionYP_737304 
Protein GI114046754 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00191634 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.790409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAA ATACTAAGTT GAATTATGGA CTTATTGCTA TTGCCAGCCA TTGGCTGAGT 
GCGGTTGCGG TAATTGGACT CTTTGCCGTC GGTGTGTGGA TGGTGGAATT GACTTACTAC
AGTGCCTGGT ACAAAACGGC GCCACATTGG CATAAAAGTA TTGGAATTTT ACTGCTGGCG
GTAACGCTGT TTCGTTTAGT TTGGCGTTTG GTCAACCCAA AGCCTGCTCC TGAGCAAAAC
CATCAGACAT GGGAAAAGGT GAGCGCCCAC ATTGCCCATG GCGCGATTTA CCTCTTATTA
CTGGTGATTA TGGCCGCTGG TATTTTGATT TCGACGGCAG AGGGCCGTGG AATTATGGTG
TTTGACTGGT TTGAGTTACC CGGCCTAACG CCACTGATTG AAAATCAGGC TGATATAGCC
GGAGATATTC ATCAATATGC CGCCTACAGC TTGATTGCTC TGGTTTTACT GCATGCGTTA
GGCGCGTTAA AGCACCATTT TATCGATAAA GATTCAACAC TACTCAAGAT GATTAAATTT
AACCGAGGAT AA
 
Protein sequence
MFRNTKLNYG LIAIASHWLS AVAVIGLFAV GVWMVELTYY SAWYKTAPHW HKSIGILLLA 
VTLFRLVWRL VNPKPAPEQN HQTWEKVSAH IAHGAIYLLL LVIMAAGILI STAEGRGIMV
FDWFELPGLT PLIENQADIA GDIHQYAAYS LIALVLLHAL GALKHHFIDK DSTLLKMIKF
NRG