| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1230 |
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| Symbol | |
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| ID | 4258261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1438170 |
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| End bp | 1440587 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121859 |
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| Product | peptidase S16, lon domain-containing protein |
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| Protein accession | YP_737286 |
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| Protein GI | 114046736 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.813888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACCG TGCCCACAGC AACACCCGCC ATCCCGTTAA CGAGTCAACA GCTTTATCGT
AAATCCGAGC TTAAACAGCT TAACCCTGAG TGTCAGTCTA CCGCTCAGCT CACGCCACTC
GACGATATTG TTGGGCAGGA ACGTGCCCAA CAGGCGGTGG AATTCGCCAT GGGGATCAAG
GAAAAGGGCT ATAACATTTA TGCTATTGGC CAAAACGGCT TAGGTAAACG CACTATGATG
CTGCGTTATC TAAATCGCCA TGATCCTATT GAACCGTCAC TGTTTGACTG GTGCTATGTG
GTTAACTTTG ACGATACTCG CAGTCCTAAA GTGCTCAAGC TGACCGCCGG AACGGGGCAA
GAGTTTAAAA AGTCCATCGA AAAACTCATG CTAAAACTGG TCAAAGCGCT GCCCTTAGCC
TTTGATAACG AAATGTATTA TGCCCGAGCA GAAAAGCTCA AAAGCCAACT GGCACAAAAA
CAAGAAGCCG CGCTGACAGA GCTGAGTGAA GAAGCCAAAC AGAAAAACAT TAGTCTCAGT
TTAACCCTGC AGGGCGATTA TCAAATGGTT GCCCTCAATG GCGAAGAGCC CCATGACGAG
GTCTCCTTTG GCGCCTTAAC CGAAGCCGAG CGCGCCCAGT TTGAAAGCAA TATCAATGGG
CTCGAAGTTA AACTTCGCGG CATCATTCGA CAAAATACCG AATGGGAAGA AGAGTTTAGC
GATACCCAAC AGGAACACGA CGAGCAAGTC GCTAAAGATG TGTTAGTGCA TTTTTTTAAA
CCTTTGAAGG ATAAGTACAA ACATCAACCC GAAGTCAGAG CCTTCTTAAC GGGCATGCAG
GCGGATATCT TAAGTAATTT AGATATTTTC CTTGAGGAGA GTGAGGAGCA ACTCGCCCTC
GCCTACGCCT CCCTTGAAAA GAAAATGCCG CGCCGCTATC AGGTCAACGT CATCGTATGC
CAAGGGGAGC AAAAATTCCC GATTGTGGTC GAAGAAAGCC CAAGCTACCA CAGCCTGTTT
GGCTATGTTG AGAACGCCAC CTTTAGGGGC ACAGTGTTTA CTGACTTCTC ACTCATCCGC
CCAGGAAGCT TACACAAAGC CAACGGTGGC GTGCTGTTGA TGGATGCCAT CAAAGTACTG
GAGCGCCCCT ATGTGTGGGA CGGCTTGAAA CGCGCACTGC GCTCCCGCAA ATTAGATTTA
AGCTCCTTAG AGCGGGAAGT CTCACTGTCG GGCACTATCT CATTGGCGCC AGAACCTATT
CCCTTAGATG TGAAAATCAT TCTGTTTGGG GATCACGAAA CCTACCAGCT TTTACAGCAT
TATGATCCTG ATTTTAGTGA GTTATTTAGG GTCACGGCCG ATTTTGAAGA TGTGATGGAC
AGAACCGATA TCTCGGAGGC GCAATATGCA CGATTTATTT CCAGCATAGT CCACGATAAC
AATATGTTGC ACTGTGACCG CAGCGCCATC GCACGCATCA TCGAATACAG TTCCCGTGAG
GCGCAGGACC AACAAAAGCT GTCGCTGCAT TCGGCAAACA TCGCCAATCT GCTTAGGGAG
TCAAACTTCT GCGCTAAGGC CGCCGCAAGT CAATGTATTG AAAAACAACA TGTTGAACAG
GCGCTGAAAA ACCAAGAACA ACGGGTCTCA CGCCTGCACG ACAATATTAT GGAAAGCTTT
ATCAATGGCA CGACATTAAT CAATACCCAC GATAAAGTTG TAGGCCAAAT CAATGCGTTA
TCAGTGATAT CAACCTCAGA TCATCAATTC GGTCTGCCGA ATCGCATTAC CGCCACCACC
GCCTTCGGTA AGGGTGAAGT GCTGGATATT GAGCATAGGG TCAAACTGGG TGGCCGCATT
CACTCTAAAG GGGTGTTAAT CCTGACAGCC TATTTGGCTT CGGTCCTTGG AAAAACCGCG
CAAATCCCCC TCACCACGTA CCTCACCTTC GAGCAATCCT ACAGCGGTGT CGATGGTGAT
AGCGCCTCGA TGGCCGAATG TTGCGCCATT ATCTCAGCCA TCAGTGAGTT ACCCTTAAGG
CAGGATATTG CCATTACTGG GTCGATGAAT CAGTTTGGCG AGGCCCAGCC CATCGGCGGC
GTGAATGAGA AAATCGAAGG CTTTTTCGAT GTGTGTAAGA TTAAGGGCCG CTCATCGAGC
CAAGGGGTAA TTATTCCCGA GTCGAATATC GCGAACCTCA TGTTACGCCA AGATATTGTA
GAAGCGGTTG AGCGTGGTGA CTTCCATATT TGGGCGATTA GCCATGTCAC CCAAGCGATG
GCACTACTCT TAGGTAAAAC GGCGGCGACC TTAGGAGGCG ATGATGGGAA ACACGCAGGT
CATTATGCCC CAGAGTGTGT ATTTGGGATT GCCCAGCAGA AACTCAATGC CCTGAGGGCG
CTCCCTAAAG CCAATTGA
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| Protein sequence | MPTVPTATPA IPLTSQQLYR KSELKQLNPE CQSTAQLTPL DDIVGQERAQ QAVEFAMGIK
EKGYNIYAIG QNGLGKRTMM LRYLNRHDPI EPSLFDWCYV VNFDDTRSPK VLKLTAGTGQ
EFKKSIEKLM LKLVKALPLA FDNEMYYARA EKLKSQLAQK QEAALTELSE EAKQKNISLS
LTLQGDYQMV ALNGEEPHDE VSFGALTEAE RAQFESNING LEVKLRGIIR QNTEWEEEFS
DTQQEHDEQV AKDVLVHFFK PLKDKYKHQP EVRAFLTGMQ ADILSNLDIF LEESEEQLAL
AYASLEKKMP RRYQVNVIVC QGEQKFPIVV EESPSYHSLF GYVENATFRG TVFTDFSLIR
PGSLHKANGG VLLMDAIKVL ERPYVWDGLK RALRSRKLDL SSLEREVSLS GTISLAPEPI
PLDVKIILFG DHETYQLLQH YDPDFSELFR VTADFEDVMD RTDISEAQYA RFISSIVHDN
NMLHCDRSAI ARIIEYSSRE AQDQQKLSLH SANIANLLRE SNFCAKAAAS QCIEKQHVEQ
ALKNQEQRVS RLHDNIMESF INGTTLINTH DKVVGQINAL SVISTSDHQF GLPNRITATT
AFGKGEVLDI EHRVKLGGRI HSKGVLILTA YLASVLGKTA QIPLTTYLTF EQSYSGVDGD
SASMAECCAI ISAISELPLR QDIAITGSMN QFGEAQPIGG VNEKIEGFFD VCKIKGRSSS
QGVIIPESNI ANLMLRQDIV EAVERGDFHI WAISHVTQAM ALLLGKTAAT LGGDDGKHAG
HYAPECVFGI AQQKLNALRA LPKAN
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